| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3121192 | 130 (1.600) | 8 (0.100) | 3/92 | NT | 6.2% | coding (1270/2172 nt) | glcB | malate synthase G |
| ? | W3110S.gb | = 3121207 | 120 (1.570) | coding (1255/2172 nt) | glcB | malate synthase G | |||||
Only 100 of 195 total aligned reads displayed.
GCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAAC > W3110S.gb/3121122‑3121262 | gCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAAT > 1:549976‑M1/1‑71 (MQ=255) aCGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGcc > 1:5484049/1‑71 (MQ=255) aCGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTAAGCGAGGTCCGACGTTCTTCATCCATAATGcc > 1:4312015/1‑71 (MQ=255) cgcgGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGcc > 1:2517618/1‑70 (MQ=255) ggTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGAGAGGTCCGACGTTCTTCATCCATAATGCCCAtt > 1:5417032/1‑71 (MQ=255) ttGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCAtttt < 1:586507/71‑1 (MQ=255) ttGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCAtttt < 1:3120149/71‑1 (MQ=255) ttGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCAtttt < 1:4507564/71‑1 (MQ=255) cgcgcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCa < 1:263709/70‑1 (MQ=255) cgcgcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCa < 1:6743413/70‑1 (MQ=255) cgcgcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCa < 1:3651479/70‑1 (MQ=255) gcgcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAgg > 1:6402399/1‑71 (MQ=255) gcgcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAgg < 1:3843866/71‑1 (MQ=255) gcCTGAGCGATACAGCTACGCAAGTTCATCGAGGTCCGACGTTCTTCATCCATAATGCCCAtttt < 1:339866/65‑1 (MQ=255) gcCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCAATTTTCAggg > 1:7333562/1‑70 (MQ=255) ccTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTa > 1:1094688‑M2/1‑70 (MQ=255) cTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTat > 1:3406729‑M2/1‑69 (MQ=255) cTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTat < 1:6813147‑M2/71‑3 (MQ=255) gAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCAtttt < 1:5781129/61‑1 (MQ=255) aGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTc < 1:2181709/70‑1 (MQ=255) aGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCg < 1:994144/71‑1 (MQ=255) gCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTc < 1:1589443/69‑1 (MQ=255) gCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTAATCCATAATGCCCATTTTCAGGGTATTCgg > 1:2060584/1‑71 (MQ=255) aTACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGc < 1:1359221/71‑1 (MQ=255) aCAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATGCATAATGCCCATTTTCa > 1:6880505/1‑56 (MQ=255) aCAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCa > 1:4824905/1‑71 (MQ=255) cTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAgg > 1:3017826/1‑54 (MQ=255) cGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGcc < 1:7707820/41‑1 (MQ=255) cGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGcc < 1:2389603/41‑1 (MQ=255) cGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAg > 1:4909872/1‑71 (MQ=255) cGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAg > 1:6029735/1‑71 (MQ=255) cAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGccc < 1:6716064/40‑1 (MQ=255) cAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAg < 1:243426/69‑1 (MQ=255) cAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCa > 1:155693/1‑71 (MQ=255) gTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAg > 1:7659098/1‑45 (MQ=255) gTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCAtt < 1:6144847/70‑1 (MQ=255) gTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTg > 1:1855481/1‑71 (MQ=255) gTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTg > 1:907285/1‑71 (MQ=255) ttCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTc < 1:7540214/42‑1 (MQ=255) ttCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTc < 1:5225691/42‑1 (MQ=255) cAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGtct > 1:6801702/1‑71 (MQ=255) aGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGtctc < 1:2128794/71‑1 (MQ=255) gCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTc > 1:3792774/1‑38 (MQ=255) gCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTc > 1:2266698/1‑47 (MQ=255) gCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCa < 1:4670382/63‑1 (MQ=255) gCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCa < 1:1198468/71‑1 (MQ=255) cGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCaa < 1:1319567/71‑1 (MQ=255) cGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCaa < 1:1928723/71‑1 (MQ=255) aGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATg < 1:5290688/71‑1 (MQ=255) ggTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGc < 1:5039307/71‑1 (MQ=255) gTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCa < 1:2798041/66‑1 (MQ=255) tCCGACGTTCTTCATCCATAATaccctgaaaatggg < 1:6588343‑M1/36‑15 (MQ=255) tCCGACGTTCTTCATCCATAATaccctgaaaatggg < 1:344541‑M1/36‑15 (MQ=255) tCCGACGTTCTTCATCCATAATGGCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCgg < 1:3702191/71‑1 (MQ=255) tCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCaa < 1:1447944/66‑1 (MQ=255) tCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCgt < 1:2090765/71‑2 (MQ=255) tCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCgg < 1:1152569/71‑1 (MQ=255) ccGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGa < 1:1405792/53‑1 (MQ=255) cGACGTTCTTCATCCATAATaccctgaaaatgggca > 1:4042117‑M1/1‑20 (MQ=255) cGACGTTCTTCATCCATAATaccctgaaaatgggca > 1:6774726‑M1/1‑20 (MQ=255) gACGTTCTTCATCCATAATGGCCATTTTCAGGGTATTCGGt > 1:4767671/1‑41 (MQ=255) gACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGcc > 1:1870177/1‑44 (MQ=255) gACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTa < 1:5092854/71‑1 (MQ=255) aCGTTCTTCATCCATAATGCCCATTTTCAGGGTat > 1:3856555‑M2/1‑33 (MQ=255) aCGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTaa < 1:2855908/71‑1 (MQ=255) cttcATCCATAATTCCCATTTTCAGGGTATTCGGTGcc > 1:794524/1‑38 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGt > 1:1464947/1‑35 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGTg < 1:4995559/36‑1 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGTg < 1:4325251/36‑1 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGtctc < 1:5348944/55‑1 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGtc > 1:2495408/1‑53 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGtc > 1:673158/1‑53 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCgg > 1:551313/1‑62 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCgg > 1:2535492/1‑62 (MQ=255) cttcATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGt > 1:6522984/1‑71 (MQ=255) ttcATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGa > 1:2693046/1‑44 (MQ=255) cATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTttg > 1:5685395/1‑71 (MQ=255) cATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTttg > 1:3022044/1‑71 (MQ=255) aTCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCaa < 1:6997738/53‑1 (MQ=255) aTCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGc < 1:4149898/56‑1 (MQ=255) tCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAAAGCGGGTAAACAGTttgtt < 1:2179901/71‑1 (MQ=255) ccATAATGCCCATTTTCAGGGTattatggatgaagaacgtcggacc > 1:1959382‑M2/1‑22 (MQ=255) cATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTa < 1:3046334/58‑1 (MQ=255) aTAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGc > 1:7830379/1‑39 (MQ=255) aTAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATg > 1:4647342/1‑51 (MQ=255) aTAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATg > 1:272760/1‑51 (MQ=255) tAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTATCAATGCGGGTAAACAGTTTGTTGGCg < 1:3059650/71‑1 (MQ=255) ataccctgaaaatgggcattatggatgaagaacgtcggacctcgctgaacttgcgtagctgtatcgctcag < 1:6132678‑M1/71‑70 (MQ=255) ataccctgaaaatgggcattatggatgaagaacgtcggacctcgctgaacttgcgtagctgtatcgctcag < 1:2261088‑M1/71‑70 (MQ=255) aTGCCCATTTTCAGGGTATTCGGTGCCATACCGAg > 1:4983652/1‑35 (MQ=255) aTGCCCATTTTCAGGGTATTCGGTGCCATACCGAg > 1:5981565/1‑35 (MQ=255) aTGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAg > 1:694289/1‑59 (MQ=255) aTGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCg > 1:1751441/1‑69 (MQ=255) aTGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCg > 1:4217386/1‑69 (MQ=255) aTGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCg > 1:3931628/1‑69 (MQ=255) aTGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGa < 1:4450681/70‑1 (MQ=255) taccctgaaaatgggcattatggatgaagaacgtcggacctcgctgaacttgcgtagctgtatcgctcagg > 1:1094688‑M1/1‑1 (MQ=255) taccctgaaaatgggcattatggatgaagaacgtcggacctcgctgaacttgcgtagctgtatcgctcag > 1:1537008‑M1/1‑1 (MQ=255) taccctgaaaatgggcattatggatgaagaacgtcgg > 1:7315203‑M1/1‑1 (MQ=255) tGCCCATTTTCAGGGTattatggatgaagaacgtcg > 1:5505772‑M2/1‑16 (MQ=255) | GCCACGCGGTTGCGCGCCTGAGCGATACAGCTACGCAAGTTCAGCGAGGTCCGACGTTCTTCATCCATAATGCCCATTTTCAGGGTATTCGGTGCCATACCGAGCATTGTCTCAATGCGGGTAAACAGTTTGTTGGCGAAC > W3110S.gb/3121122‑3121262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |