| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3191304 | 81 (0.990) | 6 (0.080) | 3/86 | NT | 7.4% | coding (441/630 nt) | yqiJ | predicted inner membrane protein |
| ? | W3110S.gb | = 3191322 | 80 (1.120) | coding (459/630 nt) | yqiJ | predicted inner membrane protein | |||||
Only 100 of 158 total aligned reads displayed.
CCTGGATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATT > W3110S.gb/3191234‑3191374 | ggATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGt > 1:5911836/1‑71 (MQ=255) ggATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGt > 1:7231700/1‑71 (MQ=255) ggATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGt > 1:7691404/1‑71 (MQ=255) gATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGt > 1:7320939/1‑70 (MQ=255) gATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTCGTAGCATGGCGTTAATTACCGGtc < 1:1935493/71‑1 (MQ=255) ttCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGtcat > 1:7664948/1‑71 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTTGTAGCATGGCGTTAATTACCGGTCATCaa < 1:3822663/71‑1 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCgg > 1:2101978/1‑64 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGtcatca < 1:1289096/70‑1 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGtcatca < 1:2499630/70‑1 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGtcatc > 1:3950237/1‑69 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGtcatc > 1:664808/1‑69 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGtcatc > 1:632806/1‑69 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCaa < 1:5333614/71‑1 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCaa < 1:5246149/71‑1 (MQ=255) cACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCaa < 1:5604687/71‑1 (MQ=255) aCGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAg > 1:5953761/1‑71 (MQ=255) cgcgACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGc < 1:2701979/71‑1 (MQ=255) cgACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCa > 1:3917537/1‑71 (MQ=255) cgACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCa > 1:1142250/1‑71 (MQ=255) ccATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACtt < 1:3163390/71‑1 (MQ=255) cATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCgg < 1:5823900/56‑1 (MQ=255) tAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAg > 1:2791756‑M2/1‑70 (MQ=255) gTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAggt > 1:7123833‑M2/1‑68 (MQ=255) gTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAggt > 1:707363‑M2/1‑68 (MQ=255) ttCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCtgaagtggcttgatgaccggt > 1:2492419‑M1/1‑49 (MQ=255) ttCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGc > 1:2903272/1‑60 (MQ=255) ttCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGc > 1:7707921/1‑60 (MQ=255) ttCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGc > 1:5074662/1‑60 (MQ=255) cAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATAAAGCCACTTCAggtaat < 1:4492971‑M2/71‑7 (MQ=255) aGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCtgaagtggcttgatgaccggtaatt < 1:4754594‑M1/71‑26 (MQ=255) aGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAggtaat > 1:4376016‑M2/1‑64 (MQ=255) cTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATccc > 1:714561/1‑71 (MQ=255) tATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCt > 1:645180/1‑71 (MQ=255) aTTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCa < 1:4752589/60‑1 (MQ=255) aTTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTg > 1:7496636/1‑71 (MQ=255) ttACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGtca < 1:5109393/46‑1 (MQ=255) ttACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTg > 1:7031671/1‑70 (MQ=255) ttACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGc > 1:7022776/1‑71 (MQ=255) tACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGc > 1:7590825/1‑70 (MQ=255) cAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAg > 1:3434911/1‑48 (MQ=255) agaagaagaATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAg < 1:43234/71‑1 (MQ=255) aagaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCAc > 1:1800085/1‑49 (MQ=255) aagaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCAc > 1:4545597/1‑49 (MQ=255) aagaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTc < 1:2411750/52‑1 (MQ=255) aagaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAgg > 1:803294/1‑70 (MQ=255) aagaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAgg > 1:2333630/1‑70 (MQ=255) aagaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAgg > 1:7269199/1‑70 (MQ=255) gaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAggtaa < 1:822887‑M2/56‑6 (MQ=255) gaagaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAggtaa < 1:4688280‑M2/56‑6 (MQ=255) agaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAg < 1:7907376‑M2/50‑2 (MQ=255) agaaTATATTGGTAGCATGGCGTTAATTACAGGTCATCAAGCCACTTCAg < 1:4281473‑M2/50‑2 (MQ=255) gaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACt < 1:6671365/71‑1 (MQ=255) gaaTATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACt < 1:2644213/71‑1 (MQ=255) atatatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTc < 1:1413879/70‑1 (MQ=255) atatatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTc < 1:4936376/70‑1 (MQ=255) atatatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACATCAGGTAATCCCTGCGAAGGAAAACTCa > 1:4842996/1‑71 (MQ=255) tatatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCAc > 1:5071163/1‑71 (MQ=255) tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCAc > 1:803130/1‑39 (MQ=255) tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCAc > 1:6534386/1‑39 (MQ=255) tatTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGaa < 1:5159158/62‑1 (MQ=255) ttGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACtt < 1:110470/39‑1 (MQ=255) gTAGCATGGCGTTAATTACCGGTCATCAAGCCACtt > 1:1656331/1‑36 (MQ=255) tAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAg < 1:3135033‑M2/38‑2 (MQ=255) tAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAAt < 1:4795106/71‑1 (MQ=255) aGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTc > 1:6888054/1‑60 (MQ=255) gCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAAttt > 1:2206381/1‑71 (MQ=255) cATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAAttt < 1:686719/70‑1 (MQ=255) aTGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTc < 1:3796104/57‑1 (MQ=255) ggCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGc > 1:2997244/1‑70 (MQ=255) gCGTTAATTACCGGTCATCAAGCCACTTCAggtaa < 1:2058014‑M2/35‑6 (MQ=255) gCGTTAATTACCGGTCATCAAGCCACTTCAggtaa < 1:4231705‑M2/35‑6 (MQ=255) tAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCg > 1:1525856/1‑39 (MQ=255) tAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCg > 1:4280135/1‑39 (MQ=255) tAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCaa < 1:417029/68‑1 (MQ=255) tAATTACCGGTCATCAAGCCACTTAAGGTAATCCCTGCg > 1:2968895/1‑39 (MQ=255) aaTTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCAc > 1:5550862/1‑51 (MQ=255) aaTTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATa > 1:1079885/1‑70 (MQ=255) aTTACCtgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttcttctgtaatagctg < 1:6508205‑M1/71‑66 (MQ=255) aTTACCtgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttcttctgtaatagct > 1:4376016‑M1/1‑6 (MQ=255) ttACCtgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttc < 1:1600101‑M1/56‑52 (MQ=255) ttACCtgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttc < 1:4688280‑M1/56‑52 (MQ=255) ttACCtgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttc < 1:1442497‑M1/56‑52 (MQ=255) ttACCtgaagtggcttgatgaccggtaattaacgc < 1:1490162‑M1/35‑31 (MQ=255) ttACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACat < 1:3765164/71‑1 (MQ=255) tACCtgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttc < 1:4272286‑M1/55‑52 (MQ=255) tACCGGTCATCAAGCCACTTCAggtaattaacgccatgctac < 1:2691300‑M2/42‑21 (MQ=255) tACCGGTCATCAAGCCACTTCAggtaattaacgccatgctac < 1:4505671‑M2/42‑21 (MQ=255) tACCGGTCATCAAGCCACTTCAggtaattaacgccatgctac < 1:7008175‑M2/42‑21 (MQ=255) tACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGcc < 1:4101424/62‑1 (MQ=255) tACCGGTCATCAAGCCACATCAggtaattaacgccatgctac < 1:1810729‑M2/42‑21 (MQ=255) aCCtgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttcttctgtaatagctgaac > 1:707363‑M1/1‑3 (MQ=255) aCCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGaaaa > 1:3668208/1‑42 (MQ=255) aCCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACatta > 1:2021714/1‑71 (MQ=255) aCCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACatt < 1:3271180/70‑1 (MQ=255) aCCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACat > 1:218301/1‑69 (MQ=255) cctgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttcttctgtaatagctgaact < 1:5222975‑M1/71‑70 (MQ=255) ctgaagtggcttgatgaccggtaattaacgccatgctaccaatatattcttcttctgtaatagctgaacta > 1:6414944‑M1/1‑1 (MQ=255) ctgaagtggcttgatgaccggtaattaacgccatgctaccaatatattct < 1:7907376‑M1/50‑50 (MQ=255) cGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAAt > 1:3052207/1‑53 (MQ=255) | CCTGGATTCCACGCGACCATAGTTCAGCTATTACAGAAGAAGAATATATTGGTAGCATGGCGTTAATTACCGGTCATCAAGCCACTTCAGGTAATCCCTGCGAAGGAAAACTCACCGATCAATTTGGCCAAATACATTATT > W3110S.gb/3191234‑3191374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |