| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3474300 | 63 (0.770) | 6 (0.090) | 3/82 | NT | 11.5% | coding (890/1101 nt) | trmA | tRNA (uracil‑5‑)‑methyltransferase |
| ? | W3110S.gb | = 3474340 | 40 (0.590) | coding (930/1101 nt) | trmA | tRNA (uracil‑5‑)‑methyltransferase | |||||
Only 100 of 126 total aligned reads displayed.
ATGAATGGTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTATTT > W3110S.gb/3474230‑3474368 | aTGAATGGTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTT < 1:7165656‑M1/71‑1 (MQ=255) aTGGTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTc < 1:4283929/71‑1 (MQ=255) ggTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGa > 1:7332183/1‑71 (MQ=255) tgCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGt > 1:5841083/1‑64 (MQ=255) gcgAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTcc > 1:6898491/1‑70 (MQ=255) gcgAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTcc > 1:166474/1‑70 (MQ=255) gcgAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCcg > 1:5375385/1‑71 (MQ=255) gAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGa < 1:892658/62‑1 (MQ=255) gAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCcgcg < 1:7761367/71‑1 (MQ=255) gTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCcgcg > 1:1558500/1‑69 (MQ=255) ttAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGc > 1:3608303/1‑71 (MQ=255) tAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCg > 1:1845883/1‑71 (MQ=255) cGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCTAAACCATTTTTGTCGa < 1:1743731/53‑1 (MQ=255) cGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCt > 1:5089384/1‑71 (MQ=255) cGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCt > 1:2112379/1‑71 (MQ=255) gCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGa > 1:4348575/1‑52 (MQ=255) gCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTg < 1:234151/71‑1 (MQ=255) gCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGGCTg > 1:3286621/1‑71 (MQ=255) cTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGa > 1:4954109/1‑71 (MQ=255) cTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGa > 1:730185/1‑71 (MQ=255) gCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGa > 1:3582353/1‑69 (MQ=255) cAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGa < 1:1085187/47‑1 (MQ=255) cAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGAc > 1:6607656/1‑48 (MQ=255) cAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAg > 1:3320075/1‑71 (MQ=255) gggATCGACTTAAAGAGTTATCAGTGCGAAACCAttttt < 1:6241532/39‑1 (MQ=255) gggATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGa < 1:4082207/71‑1 (MQ=255) ggATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGa > 1:2769449/1‑70 (MQ=255) aTCGACTTAAAGAGTTATCAGTGCGAAACCATTTTctcggtttcactgtccagaccgctgcgcg < 1:2058192‑M1/64‑30 (MQ=255) aTCGACTTAAAGAGTTATCAGTGCGAAACCATTTTctcggtttcactgtccagaccgctgcgcg < 1:2067171‑M1/64‑30 (MQ=255) aTCGACTTAAAGAGTTATCAGTGCGAAACCATTTTctcggtttcactgtccagaccgctgcgcg < 1:6747689‑M1/64‑30 (MQ=255) aTCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAAc < 1:1061377/71‑1 (MQ=255) tCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGt > 1:2773027/1‑37 (MQ=255) tCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGt > 1:1934072/1‑37 (MQ=255) tCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGt > 1:6207923/1‑37 (MQ=255) tCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAAcc > 1:1800171/1‑71 (MQ=255) tCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAAcc < 1:2608513/71‑1 (MQ=255) aCTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGAc < 1:529253/59‑1 (MQ=255) aCTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGAc < 1:6134598/59‑1 (MQ=255) ttAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAg < 1:6521251/47‑1 (MQ=255) aaaGAGTTATCAGTGCGAAACCATTTTctcggtttcactgtccagaccgctgcgcggagggtcgacaaa < 1:843231‑M1/69‑43 (MQ=255) aaaGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaa < 1:5780034‑M2/71‑5 (MQ=255) aaaGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaa > 1:6769928‑M2/1‑67 (MQ=255) aaaGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaa > 1:1711056‑M2/1‑67 (MQ=255) aaaGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaa > 1:1720772‑M2/1‑67 (MQ=255) aaGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaat < 1:3513770‑M2/71‑6 (MQ=255) gagTTATCAGTGCGAAACCATTTTctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatgg < 1:1189161‑M1/71‑48 (MQ=255) gagTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCg > 1:5164855/1‑44 (MQ=255) gagTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCg > 1:3499131/1‑44 (MQ=255) gagTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCga > 1:688/1‑63 (MQ=255) ttATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaa > 1:679611‑M2/1‑61 (MQ=255) ttATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaa > 1:3347392‑M2/1‑61 (MQ=255) ataaGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATgg > 1:7490924/4‑66 (MQ=255) aTCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGa > 1:3534171/1‑52 (MQ=255) aTCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAAcc < 1:3397353/56‑1 (MQ=255) aTCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaa < 1:4134780‑M2/63‑5 (MQ=255) aTCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaa < 1:7166075‑M2/63‑5 (MQ=255) aTCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAg > 1:50181/1‑71 (MQ=255) aTCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAg > 1:7655427/1‑71 (MQ=255) cAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaatg < 1:7602154‑M2/63‑7 (MQ=255) aGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCg > 1:7224679/1‑71 (MQ=255) gttcGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGt < 1:4688430/68‑1 (MQ=255) gTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGt < 1:6915761/37‑1 (MQ=255) tGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAgg < 1:7743212/67‑1 (MQ=255) gCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTa > 1:4271244/1‑70 (MQ=255) cGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGt < 1:2410271/43‑1 (MQ=255) gAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGa < 1:375684/38‑1 (MQ=255) gAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATcc > 1:4977469/1‑71 (MQ=255) aaaCCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCcg > 1:1653719/1‑71 (MQ=255) aaCCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCcgc > 1:602458/1‑71 (MQ=255) aCCATTTTctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataact > 1:7714952‑M1/1‑8 (MQ=255) aCCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCgag > 1:265061/1‑48 (MQ=255) aCCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCg < 1:6654658/46‑1 (MQ=255) aCCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCcgc > 1:5709870/1‑70 (MQ=255) ccATTTTctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactc > 1:7541936‑M1/1‑7 (MQ=255) ccATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaatggtttcgcactgataactc < 1:1189161‑M2/71‑25 (MQ=255) cATTTTctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactg < 1:7602154‑M1/63‑58 (MQ=255) cATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTa > 1:2801003/1‑71 (MQ=255) cATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTa > 1:6473925/1‑71 (MQ=255) aTTTTctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactctt < 1:3513770‑M1/71‑67 (MQ=255) aTTTTctcggtttcactgtccagaccgctgcgcggagggtcgac < 1:5483619‑M1/44‑40 (MQ=255) aTTTTctcggtttcactgtccagaccgctgcgcgga > 1:4937275‑M1/1‑5 (MQ=255) aTTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTg < 1:983900/54‑1 (MQ=255) tttttGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTAtt < 1:2171110/71‑1 (MQ=255) tttttGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTAtt > 1:4002697/1‑71 (MQ=255) ttttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactcttt < 1:5780034‑M1/71‑68 (MQ=255) ttttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataa > 1:3347392‑M1/1‑4 (MQ=255) ttttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgat < 1:7166075‑M1/63‑60 (MQ=255) ttttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgat < 1:4134780‑M1/63‑60 (MQ=255) ttttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcg > 1:5736105‑M1/1‑4 (MQ=255) tttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactct < 1:4893082‑M1/68‑66 (MQ=255) tttGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGaaaatggtttcgcactgataactcttt < 1:843231‑M2/69‑28 (MQ=255) tttGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTAttt < 1:1558096/70‑1 (MQ=255) ttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactcttt > 1:1720772‑M1/1‑2 (MQ=255) ttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactcttt > 1:1711056‑M1/1‑2 (MQ=255) ttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactcttt > 1:6769928‑M1/1‑2 (MQ=255) ttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactcttt > 1:990935‑M1/1‑2 (MQ=255) ttctcggtttcactgtccagaccgctgcgcggagggtcgacaaaaatggtttcgcactgataactctt > 1:4407945‑M1/1‑2 (MQ=255) ttctcggtttcactgtccagaccgctgcgcggagggtcgac > 1:4531468‑M1/1‑2 (MQ=255) ttGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCga > 1:6263595/1‑40 (MQ=255) ttGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTAt > 1:5536004/1‑59 (MQ=255) | ATGAATGGTGTGCGCGAGTTTAACCGCCTGCAAGGGATCGACTTAAAGAGTTATCAGTGCGAAACCATTTTTGTCGACCCTCCGCGCAGCGGTCTGGACAGTGAAACCGAGAAAATGGTGCAGGCGTATCCGCGTATTT > W3110S.gb/3474230‑3474368 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |