| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3815066 = | 101 (1.240) | 5 (0.070) | 4/90 | NT | 5.3% | coding (142/2082 nt) | recG | ATP‑dependent DNA helicase |
| ? | W3110S.gb | 3815084 = | 87 (1.160) | coding (124/2082 nt) | recG | ATP‑dependent DNA helicase | |||||
Only 100 of 142 total aligned reads displayed.
AGTTCAGCACTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCGCCAG > W3110S.gb/3814997‑3815135 | aGTTCAGCACTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTg > 1:2770927/1‑71 (MQ=255) gTTCAGCACTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGc < 1:4112008/71‑1 (MQ=255) agcacttagtaacaaactggcgaaaatcaacctgcataccgtgcaggatctactcttacaccttccccTg > 1:2147883‑M1/69‑70 (MQ=255) agcacttagtaacaaactggcgaaaatcaacctgcataccgtgcaggatctactcttacaccttccccTGc < 1:2310965‑M1/3‑1 (MQ=255) agcacttagtaacaaactggcgaaaatcaacctgcataccgtgcaggatctactcttacaccttccccTGc < 1:3073963‑M1/3‑1 (MQ=255) agcacttagtaacaaactggcgaaaatcaacctgcataccgtgcaggatctactcttacaccttccccTGc < 1:2873158‑M1/3‑1 (MQ=255) aGCACTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATc < 1:3484409/71‑1 (MQ=255) gCACTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCt < 1:692716/71‑1 (MQ=255) cTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGTGTAGAGATGGGTGCGATCTTCg < 1:5867460/71‑1 (MQ=255) cTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCg < 1:6934567/71‑1 (MQ=255) cTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCg < 1:6523733/71‑1 (MQ=255) tCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCg > 1:4199043/1‑69 (MQ=255) tCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCg > 1:144092/1‑69 (MQ=255) cGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTa < 1:5897930/70‑1 (MQ=255) tCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCg < 1:3841894/63‑1 (MQ=255) tCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCg < 1:5574270/63‑1 (MQ=255) tCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAg > 1:5584943/1‑71 (MQ=255) ctggcgaaaatcaacctgcataccgtgcaggatctactcttacaccttccccTGCg < 1:2227703‑M1/4‑1 (MQ=255) ccACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAgg > 1:3436720/1‑71 (MQ=255) ccACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAg < 1:3792955/70‑1 (MQ=255) ccACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAg < 1:4334479/70‑1 (MQ=255) cACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAggg > 1:4142806/1‑71 (MQ=255) cACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAggg > 1:1854929/1‑71 (MQ=255) cACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAggg < 1:7346271/71‑1 (MQ=255) cgaaaatcaacctgcataccgtgcaggatctactcttacaccttccccTGCg > 1:3862568‑M1/49‑52 (MQ=255) ccGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAgggg > 1:6432807/1‑70 (MQ=255) cGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGAt > 1:5101570/1‑53 (MQ=255) cGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAgggg > 1:4020068/1‑69 (MQ=255) gTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAg < 1:2183276/71‑1 (MQ=255) tGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAgcg > 1:1067286/1‑61 (MQ=255) aaatcaacctgcataccgtgcaggatctactcttacaccttccccTGc < 1:4497867‑M1/3‑1 (MQ=255) aaatcaacctgcataccgtgcaggatctactcttacaccttccccTGc < 1:6908388‑M1/3‑1 (MQ=255) aaatcaacctgcataccgtgcaggatctactcttacaccttccccTGCGATCTTCGTAGCGCAggg < 1:867479‑M1/21‑1 (MQ=255) aTAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGgtgt > 1:2269728/1‑70 (MQ=255) tAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGgtgt > 1:4616219/1‑69 (MQ=255) acctgcataccgtgcaggatctactcttacaccttccccTGCGATCTTCGTAGCGCAgg > 1:645097‑M1/40‑59 (MQ=255) acctgcataccgtgcaggatctactcttacaccttccccTGCGATCTTCGTAGCGCAgg > 1:4939655‑M1/40‑59 (MQ=255) acctgcataccgtgcaggatctactcttacaccttccccTGCGATCTTCGTAGCGCAGGGGAAg < 1:7757944‑M1/25‑1 (MQ=255) aaaCGCCCGGCAGTAGTTCTCAGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGgtgt > 1:7660353/1‑68 (MQ=255) aaCGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAgcgc > 1:1015269/1‑55 (MQ=255) aaCGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTaa > 1:6351877/1‑69 (MQ=255) aCGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAagag > 1:465868/1‑71 (MQ=255) gcataccgtgcaggatctactcttacaccttccccTGc < 1:4232982‑M1/3‑1 (MQ=255) gcataccgtgcaggatctactattacaccttccccTGc < 1:1386019‑M1/3‑1 (MQ=255) gCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAagag > 1:527830/1‑69 (MQ=255) cccGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTg < 1:3227155/36‑1 (MQ=255) cccGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCtt > 1:6514484/1‑43 (MQ=255) cccGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAagag > 1:2675371/1‑68 (MQ=255) ccGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAagag > 1:4379135/1‑67 (MQ=255) ggCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGa < 1:1778354/54‑1 (MQ=255) ggCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGa < 1:7361067/54‑1 (MQ=255) ggCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATc > 1:1234497/1‑71 (MQ=255) gCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGAt > 1:1884888/1‑36 (MQ=255) gCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATcc < 1:6075871/71‑1 (MQ=255) cgtgcaggatctactcttacaccttccccTGCGATCt > 1:3522959‑M1/30‑37 (MQ=255) agtagtTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCCCAGGGGAAGGTGTAAGAGTAGATCCTg < 1:3172199/71‑1 (MQ=255) tagtTCTCCGATGGGGTAGAGATGGGTGCGATCtt < 1:1885150/35‑1 (MQ=255) tagtTCTCCGATGGGGTAGAGATGGGTGCGATCtt < 1:1035788/35‑1 (MQ=255) tagtTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCa < 1:7537018/71‑1 (MQ=255) tagtTCTCCGATGGGGTAGAGATGGGTGAGATCtt < 1:3014/35‑1 (MQ=255) agtTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAgg > 1:4642078/1‑45 (MQ=255) agtTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAgg > 1:5588005/1‑45 (MQ=255) gtTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACg > 1:1992003/1‑71 (MQ=255) ttCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACgg < 1:25449/71‑1 (MQ=255) tctcCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATc < 1:7508666/62‑1 (MQ=255) ctcCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTa > 1:6076215/1‑71 (MQ=255) ccGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCa < 1:6693070/64‑1 (MQ=255) ccGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATg > 1:6200224/1‑71 (MQ=255) cGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTAt < 1:1933562/69‑1 (MQ=255) cGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATg > 1:3957933/1‑70 (MQ=255) gATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGt < 1:6282971/52‑1 (MQ=255) aTGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAg < 1:7515984/41‑1 (MQ=255) aTGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGa < 1:6861208/54‑1 (MQ=255) aTGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGa < 1:4388063/54‑1 (MQ=255) aTGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATcc > 1:6917834/1‑57 (MQ=255) aTGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATcc > 1:5174163/1‑57 (MQ=255) aTGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATcc > 1:1389438/1‑57 (MQ=255) aTGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAg > 1:2091232/1‑71 (MQ=255) tGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACgg < 1:5115926/63‑1 (MQ=255) tGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAg < 1:1710368/70‑1 (MQ=255) tGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAg < 1:1603211/70‑1 (MQ=255) ggggTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTATATCCTGCACGGTATGCAGGt > 1:2629108/1‑71 (MQ=255) gggTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGtt > 1:4893441/1‑71 (MQ=255) gggTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGt < 1:7436114/70‑1 (MQ=255) gTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGa < 1:3606323/71‑1 (MQ=255) agagATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCa > 1:3031190/1‑54 (MQ=255) agagATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCa > 1:5631633/1‑54 (MQ=255) gagaTGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTa > 1:5468899/1‑38 (MQ=255) gaTGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATc < 1:3900600/46‑1 (MQ=255) gaTGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTc < 1:5303415/71‑1 (MQ=255) aTGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCg > 1:1487506/1‑71 (MQ=255) aTGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCg > 1:5523730/1‑71 (MQ=255) aTGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCg > 1:3812023/1‑71 (MQ=255) aTGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCg > 1:2881155/1‑71 (MQ=255) gggTGCGATCTTCGTAGCGCAGGGGAAGGTGTAagag > 1:1339151/1‑37 (MQ=255) gggTGCGATCTTCGTAGCGCAGGGGAAGGTGTAagag > 1:3442510/1‑37 (MQ=255) ggTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCGc > 1:4466876/1‑69 (MQ=255) ggTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCGCCa < 1:866963/71‑1 (MQ=255) ggTGCGATATTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCa < 1:5638202/56‑1 (MQ=255) gTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCGCCAg > 1:7459855/1‑71 (MQ=255) | AGTTCAGCACTTCGCCTTCCACCGTGGCATAAACGCCCGGCAGTAGTTCTCCGATGGGGTAGAGATGGGTGCGATCTTCGTAGCGCAGGGGAAGGTGTAAGAGTAGATCCTGCACGGTATGCAGGTTGATTTTCGCCAG > W3110S.gb/3814997‑3815135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |