| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3914413 = | 128 (1.570) | 7 (0.100) | 3/84 | NT | 6.7% | coding (118/996 nt) | yiaH | conserved inner membrane protein |
| ? | W3110S.gb | 3914449 = | 84 (1.200) | coding (82/996 nt) | yiaH | conserved inner membrane protein | |||||
Only 100 of 170 total aligned reads displayed.
AGCCGGAAATCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATCACCACCATTAAA > W3110S.gb/3914344‑3914483 | ccGGAAATCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCAtgt < 1:5367035/71‑1 (MQ=255) ccGGAAATCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCAt < 1:3349923/69‑1 (MQ=255) cGGAAATCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCa > 1:669303/1‑67 (MQ=255) actggattgataacctgcgagggatagcgtgtttaatggtggtgatgattcacaccactacctggtAtgt > 1:7616829‑M1/67‑70 (MQ=255) actggattgataacctgcgagggatagcgtgtttaatggtggtgatgattcacaccactacctggtAtgt > 1:1561918‑M1/67‑70 (MQ=255) ggAAATCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGa < 1:1934408/71‑1 (MQ=255) ctggattgataacctgcgagggatagcgtgtttaatggtggtgatgattcacaccactacctggtATGTGa > 1:5397437‑M1/66‑71 (MQ=255) gAAATCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGAc < 1:1870725/71‑1 (MQ=255) gAAATCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGAc > 1:616871/1‑71 (MQ=255) aaTCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACgg < 1:5484521/71‑1 (MQ=255) aTCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGa < 1:1035434/67‑1 (MQ=255) aTGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGc > 1:4614740/1‑70 (MQ=255) aTGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCt < 1:1605421/71‑1 (MQ=255) tGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCt < 1:4833679/70‑1 (MQ=255) tGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTa < 1:4073535/71‑1 (MQ=255) taacctgcgagggatagcgtgtttaatggtggtgatgattcacaccactacctggtAtgt > 1:2768956‑M1/57‑60 (MQ=255) gAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCAtgt < 1:5916680/60‑1 (MQ=255) gAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTaa > 1:1999395/1‑71 (MQ=255) gAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTaa > 1:3108797/1‑71 (MQ=255) aaaaaTAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTaa > 1:1430843/1‑70 (MQ=255) aaaaaTAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTaa > 1:6248647/1‑70 (MQ=255) aaaaaTAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTaa > 1:1279377/1‑70 (MQ=255) aaaaaTAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAac < 1:6095863/71‑1 (MQ=255) aaaTAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAacac > 1:7066233/1‑71 (MQ=255) aaTAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACg > 1:1078184/1‑60 (MQ=255) aaTAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACg > 1:2189221/1‑60 (MQ=255) tAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTAt < 1:6554481/71‑1 (MQ=255) aGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTAt < 1:4154233/70‑1 (MQ=255) aGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGCGCTAACACTAt > 1:3577460/1‑70 (MQ=255) cGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAg < 1:4489846/71‑1 (MQ=255) gCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCa > 1:4735797/1‑71 (MQ=255) gCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCa < 1:4724339/71‑1 (MQ=255) cACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACt < 1:6113483/63‑1 (MQ=255) cACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACt < 1:7385022/63‑1 (MQ=255) cACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCAt > 1:1426477/1‑71 (MQ=255) aCGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCAtt < 1:5234720/71‑1 (MQ=255) aCGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCAtt < 1:3186697/71‑1 (MQ=255) cGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACgg < 1:3494152/51‑1 (MQ=255) cGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTg > 1:2215630/1‑71 (MQ=255) cTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACt < 1:6468324/59‑1 (MQ=255) cTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGt < 1:4450269/71‑1 (MQ=255) gACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGAATTGGTca > 1:3844381/1‑71 (MQ=255) acacGAGAGGCAGAATTCAGAACATTGGCGATATCCCAtg > 1:6712733/1‑40 (MQ=255) acacGAGAGGCAGAATTCAGAACATTGGCGATATCCCAtg > 1:2565810/1‑40 (MQ=255) acacGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGc < 1:969626/49‑1 (MQ=255) acacGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGc < 1:371481/49‑1 (MQ=255) acacGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTcac < 1:5785775/71‑1 (MQ=255) acGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTAt > 1:5123730/1‑56 (MQ=255) gagaGGCAGAATTCAGAACATTGGCGATATCCCATGTGa > 1:641251/1‑39 (MQ=255) gagaGGCAGAATTCAGAACATTGGCGATATCCCATGTGa > 1:846200/1‑39 (MQ=255) atggtggtgatgattcacaccactacctggtATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCa > 1:4627810‑M1/32‑71 (MQ=255) gCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGt < 1:7160709/71‑1 (MQ=255) gAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAgt > 1:2801882/1‑71 (MQ=255) aTTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGa > 1:2671959/1‑46 (MQ=255) ttCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTa > 1:7399906/1‑42 (MQ=255) ttCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTa > 1:3235562/1‑42 (MQ=255) ttCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTa > 1:4088791/1‑42 (MQ=255) tgattcacaccactacctggtATGTGACGGGGCTAACACTATGAGCATTGGTca < 1:2199535‑M1/33‑1 (MQ=255) tgattcacaccactacctggtATGTGACGGGGCTAACACTATGAGCATTGGTca < 1:7831048‑M1/33‑1 (MQ=255) cAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAgtggtg < 1:3477135/70‑1 (MQ=255) attcacaccactacctggtATGTGACGGGGCTAACACTATGAGCATTg > 1:2457860‑M1/20‑48 (MQ=255) attcacaccactacctggtATGTGACGGGGCTAACACTATGAGCATTg > 1:4539130‑M1/20‑48 (MQ=255) aGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTa > 1:1251881/1‑63 (MQ=255) aGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAg > 1:1136320/1‑64 (MQ=255) aGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGgtgt > 1:6896333/1‑70 (MQ=255) aGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGtgtg < 1:3579495/71‑1 (MQ=255) aGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGggtg < 1:4223322/71‑1 (MQ=255) gAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGtgtg > 1:5485790/1‑70 (MQ=255) aCATTGGCGATATCCCATGTGACGGGGCTAACACTa > 1:3039961/1‑36 (MQ=255) aCATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTcaca > 1:7734638/1‑51 (MQ=255) aCATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTcaca > 1:2527178/1‑51 (MQ=255) aCATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTcaca > 1:961707/1‑51 (MQ=255) aCATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACAt > 1:2291154/1‑52 (MQ=255) cATTGGCGATATCCCATGTGACGGGGCTAACACTATGATCATTGGTCACATACCAGGTAGTGGTGTGAatc < 1:2012591/71‑1 (MQ=255) cATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTc > 1:4177828/1‑47 (MQ=255) cATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTc > 1:1812683/1‑47 (MQ=255) cATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAat > 1:7306946/1‑70 (MQ=255) cATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAat > 1:3966286/1‑70 (MQ=255) cATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAat > 1:5033595/1‑70 (MQ=255) cATTGGCGATATCCCATGTGACGGGGCTAAAACTATGAGCATTGGTc > 1:4784128/1‑47 (MQ=255) aTTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAatca < 1:4022519/71‑1 (MQ=255) ttGGCGATATTCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAatca > 1:6338654/1‑70 (MQ=255) ttGGCGATATCCCATGTGACGGGGCTAACACTATGAg < 1:2486197/37‑1 (MQ=255) ttGGCGATATCCCATGTGACGGGGCTAACACTATGAg < 1:794637/37‑1 (MQ=255) ttGGCGATATCCCATGTGACGGGGCTAACACTATGAg < 1:362791/37‑1 (MQ=255) ttGGCGATATCCCATGTGACGGGGCTAACACTATGAg < 1:5729523/37‑1 (MQ=255) tGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGgtgt > 1:770990/1‑63 (MQ=255) tGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGgtgt > 1:2428208/1‑63 (MQ=255) cGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATAcc > 1:5300544/1‑48 (MQ=255) cGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATAcc > 1:726510/1‑48 (MQ=255) cGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATAcc < 1:596393/48‑1 (MQ=255) gATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATcacca < 1:5801914/71‑1 (MQ=255) tatCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATcaccac > 1:1223937/1‑70 (MQ=255) tatCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATcaccac > 1:4970344/1‑70 (MQ=255) tatCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATCaccacc < 1:6225480/71‑1 (MQ=255) tCCCATGTGACGGGGCTAACACTATGAGCATTGGTcaca > 1:4312259/1‑39 (MQ=255) cccATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATCACCACCAt < 1:6382859/70‑1 (MQ=255) ccATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATCACCACCATTa < 1:3466313/71‑1 (MQ=255) cATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATCACCACCATTaa < 1:3843623/71‑1 (MQ=255) ATGTGACGGGGCTAACACTATGAGCATTGGTCACATACAAGGTAGTGGTGTGAATCATCACCACCATaaaa < 1:271815‑M1/71‑1 (MQ=255) | AGCCGGAAATCATGAAAAATAGCGGCACGCTGACACGAGAGGCAGAATTCAGAACATTGGCGATATCCCATGTGACGGGGCTAACACTATGAGCATTGGTCACATACCAGGTAGTGGTGTGAATCATCACCACCATTAAA > W3110S.gb/3914344‑3914483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |