| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 4202600 = | 136 (1.670) | 10 (0.140) | 4/84 | NT | 8.8% | coding (1301/1377 nt) | trkA | NAD‑binding component of TrK potassium transporter |
| ? | W3110S.gb | 4202649 = | 90 (1.290) | coding (1252/1377 nt) | trkA | NAD‑binding component of TrK potassium transporter | |||||
Only 100 of 204 total aligned reads displayed.
GAAGAAAGGGCTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTACCACCGCTC > W3110S.gb/4202530‑4202669 | gtcggcagagtcattgacgaaatcaagctaccgccaggaacgattattggagcggtggtacgtggaaacga < 1:2476135‑M1/1‑1 (MQ=255)gaagaaAGGGCTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTa > 1:7312367/1‑71 (MQ=255)gaagaaAGGGCTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTa > 1:6742299/1‑71 (MQ=255) tcggcagagtcattgacgaaatcaagctaccgccaggaacgattattggagcggtggtacgtggaaacgac > 1:4995509‑M1/70‑71 (MQ=255) cggcagagtcattgacgaaatcaagctaccgccaggaacgattattggagcggtggtacgtggaaacgacg < 1:528403‑M1/3‑1 (MQ=255) gcagagtcattgacgaaatcacgctaccgccaggaacgattattggagcggtggtacgtggaaacgacg < 1:3574212‑M1/3‑1 (MQ=255) cagagtcattgacgaaatcaagctaccgccaggaacgattattggagcggtggtacgtggaaacgACGTGa > 1:864337‑M1/66‑71 (MQ=255) cagagtcattgacgaaatcaagctaccgccaggaacgattattggagcggtggtacgtggaaacgACGTGa > 1:6395667‑M1/66‑71 (MQ=255) cagagtcattgacgaaatcaagctaccgccaggaacgattattggagcggtggtacgtggaaacgACGTGa < 1:1722367‑M1/6‑1 (MQ=255) aGGGCTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGAt > 1:7200742/1‑71 (MQ=255) aGGGCTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGAt < 1:578456/71‑1 (MQ=255) ggCTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCg > 1:4918910/1‑71 (MQ=255) gCTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGc > 1:2780125/1‑71 (MQ=255) cTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGcc < 1:743700/71‑1 (MQ=255) ggCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCtt < 1:2390636/70‑1 (MQ=255) gCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTg < 1:4010481/70‑1 (MQ=255) cTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCt > 1:4490788/1‑71 (MQ=255) tGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTg < 1:7082726/59‑1 (MQ=255) aaGAGTCTTTCGACGTAGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTg > 1:5542469/1‑65 (MQ=255) cTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGAt > 1:7804155/1‑52 (MQ=255) cTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGAt > 1:3720200/1‑52 (MQ=255) tttCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATgcg > 1:4689563/1‑67 (MQ=255) gctaccgccaggaacgattattggagcggtggtacgtggaaacgACGTGATCGCCTTGCTCAATgcg < 1:5160506‑M1/23‑1 (MQ=255) gctaccgccaggaacgattattggagcggtggtacgtggaaacgACGTGATCGCCTTGCTCAATgcg < 1:3888985‑M1/23‑1 (MQ=255) tCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGt > 1:642416/1‑46 (MQ=255) tCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATg > 1:511110/1‑63 (MQ=255) tCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGAtt > 1:7843355/1‑71 (MQ=255) cGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGa > 1:139931/1‑47 (MQ=255) cGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTg > 1:798762/1‑71 (MQ=255) gACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCt < 1:5593158/52‑1 (MQ=255) gTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAAt > 1:1332568/1‑57 (MQ=255) ccaggaacgattattggagcggtggtacgtggaaacgac > 1:6945060‑M1/38‑39 (MQ=255) tCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCAtt < 1:4521280/71‑1 (MQ=255) ggTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATAGCCTTGCTCAATGCGCAGATTGTCATTgg > 1:6601718/1‑71 (MQ=255) gaacgattattggagcggtggtacgtggaaacgac > 1:1857006‑M1/34‑35 (MQ=255) gaacgattattggagcggtggtacgtggaaacgac > 1:1916934‑M1/34‑35 (MQ=255) gaacgattattggagcggtggtacgtggaaacgac > 1:3076566‑M1/34‑35 (MQ=255) aataaACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTc > 1:2742974/1‑48 (MQ=255) aataaACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTc > 1:4620856/1‑48 (MQ=255) aataaACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCaa > 1:4437215/1‑71 (MQ=255) aataaACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCaa > 1:6059337/1‑71 (MQ=255) cgattattggagcggtggtacgtggaaacgACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAat < 1:3617311‑M1/41‑1 (MQ=255) ataaACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCAt < 1:1793191/64‑1 (MQ=255) ataaACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCAt < 1:2939006/64‑1 (MQ=255) ataaACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAat > 1:4225582/1‑71 (MQ=255) aaaCTTTTTATCTGTGAGGAACATAATTACGTGATCGCCt < 1:5755062/40‑1 (MQ=255) aaaCTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTc < 1:2616223/45‑1 (MQ=255) aaaCTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGa < 1:4836041/55‑1 (MQ=255) aaCTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAatcat > 1:255231/1‑71 (MQ=255) aCTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCaa > 1:434200/1‑45 (MQ=255) aCTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCaa > 1:4604979/1‑45 (MQ=255) aCTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAatcat > 1:5876570/1‑70 (MQ=255) aCTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAatcat > 1:5358786/1‑70 (MQ=255) cTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCa > 1:7257904/1‑50 (MQ=255) cTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAAtcatca > 1:229579/1‑71 (MQ=255) tttttATCTGTGAGGAACATAATTACGTGATCGCCtt < 1:1096055/37‑1 (MQ=255) tttttATCTGTGAGGAACATAATTACGTGATCGCCTTGc < 1:3845855/39‑1 (MQ=255) tttATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAat > 1:1054040/1‑63 (MQ=255) tttATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAcgt > 1:7687201/1‑71 (MQ=255) tttATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAcgt > 1:7148343/1‑71 (MQ=255) tttATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAcgt > 1:6699869/1‑71 (MQ=255) tttATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAcg < 1:2314171/70‑1 (MQ=255) tttATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAc < 1:5398170/69‑1 (MQ=255) tttATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAc < 1:6854455/69‑1 (MQ=255) tttATCTGTGAGGAACATAATTACGTGATCGACTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAcgt > 1:5980112/1‑71 (MQ=255) tgtgAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGtt > 1:7518446/1‑69 (MQ=255) gtgAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAcgtc < 1:5231311/65‑1 (MQ=255) gtgAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCAcg < 1:6218036/63‑1 (MQ=255) tgAGGAACATAATTACGTGATCGCCTTGCTCAATGTGCAGATTGTCATTGGCAatcatc < 1:1999189/59‑1 (MQ=255) tgAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACTTCGTTTCCa > 1:6147137/1‑71 (MQ=255) gAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAatcatc < 1:189017/58‑1 (MQ=255) aGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCaa > 1:4595879/1‑52 (MQ=255) aGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCaa > 1:6095800/1‑52 (MQ=255) aGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCaa > 1:3392390/1‑52 (MQ=255) aGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCAc < 1:4235539/70‑1 (MQ=255) aGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCAc < 1:3503555/70‑1 (MQ=255) aGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCAc < 1:7010297/70‑1 (MQ=255) aGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCAc < 1:6970620/70‑1 (MQ=255) aGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACg > 1:5801534/1‑71 (MQ=255) aGGAACATAATTACGTGATCGCCTTGATCAATGCGCAGATTGTCATTGGCaa > 1:5724938/1‑52 (MQ=255) aaCATAATTACGTGATCGCCTTGCTCAATGCGCAGa < 1:6942493/36‑1 (MQ=255) aaCATAATTACGTGATCGCCTTGCTCAATGCGCAGa < 1:5658825/36‑1 (MQ=255) cATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTacca > 1:7600035/1‑71 (MQ=255) cATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTacca < 1:4752843/71‑1 (MQ=255) aTAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTaccac > 1:6921180/1‑71 (MQ=255) tAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAatcat < 1:5858042/49‑1 (MQ=255) tAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACg < 1:1957687/64‑1 (MQ=255) aaTTACGTGATCGCCTTGCTCAATGCGCAGATTGTCa < 1:168376/37‑1 (MQ=255) aaTTACGTGATCGCCTTGCTCAATGCGCAGATTGTCTTTGGCAATCATCACGTCGTTTCCAc < 1:6748056/62‑1 (MQ=255) aaTTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGttt > 1:2673317/1‑58 (MQ=255) aaTTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCAc < 1:5487696/62‑1 (MQ=255) aTTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTa > 1:2153471/1‑64 (MQ=255) aTTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTa > 1:1251337/1‑64 (MQ=255) aTTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTACCACCg > 1:7783070/1‑70 (MQ=255) aTTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTACCACCGc > 1:410442/1‑71 (MQ=255) ttACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTa > 1:1507378/1‑63 (MQ=255) tACGTGATCGCCTTGCTCAATGCG‑AGATTGTCATTGGCAATCATCACGTCGTTTCCACg > 1:3881605/1‑59 (MQ=255) ACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGt < 1:3699754‑M1/60‑1 (MQ=255) ACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTACCACCGCTc < 1:7475712‑M1/70‑1 (MQ=255) ACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTACCACCGCTc < 1:5017180‑M1/70‑1 (MQ=255) | GAAGAAAGGGCTTGGCTGGAAGAGTCTTTCGACGTCGGTAATAAACTTTTTATCTGTGAGGAACATAATTACGTGATCGCCTTGCTCAATGCGCAGATTGTCATTGGCAATCATCACGTCGTTTCCACGTACCACCGCTC > W3110S.gb/4202530‑4202669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |