| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 226279 | NA (NA) | 9 (0.120) | 6/92 | NT | 9.4% | noncoding (521/2904 nt) | rrlH | 23S ribosomal RNA |
| ? | W3110S.gb | = 226310 | 92 (1.130) | noncoding (552/2904 nt) | rrlH | 23S ribosomal RNA | |||||
Only 100 of 136 total aligned reads displayed.
CCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAG > W3110S.gb/226242‑226380 | ccccGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCgtg < 1:363367/70‑1 (MQ=35) ggCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACt > 1:6392815/1‑71 (MQ=34) ggCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACt > 1:7646702/1‑71 (MQ=34) aGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGt < 1:3646558/71‑1 (MQ=34) ggAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTAcc < 1:7795138/71‑1 (MQ=34) gAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCt > 1:7462528/1‑71 (MQ=34) gAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCt > 1:234955/1‑71 (MQ=34) aGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCtt < 1:3799611/71‑1 (MQ=34) aGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCtt < 1:664744/71‑1 (MQ=34) aGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCtt > 1:5724883/1‑71 (MQ=34) gTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCttt < 1:189288/71‑1 (MQ=34) gTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCttt > 1:3389556/1‑71 (MQ=34) tGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCtttt > 1:1016332/1‑71 (MQ=34) tGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCtt < 1:1040391/69‑1 (MQ=35) tGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCtt < 1:4857287/69‑1 (MQ=35) aaaaaGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCgtg > 1:6518794/1‑53 (MQ=35) aaaaaGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTg > 1:5127145/1‑70 (MQ=35) aaaGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGta > 1:6989932/1‑70 (MQ=35) aaGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGa > 1:7526771/1‑53 (MQ=35) aaGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGtat > 1:6200108/1‑70 (MQ=35) aGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGa > 1:4533717/1‑52 (MQ=35) aGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATaa > 1:659894/1‑71 (MQ=34) aGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATaa < 1:6998833/71‑1 (MQ=34) aGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATaa < 1:2028624/71‑1 (MQ=34) gAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATaa < 1:335504/70‑1 (MQ=35) aCCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATgg > 1:2271276/1‑71 (MQ=34) tGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACt < 1:2829785/48‑1 (MQ=38) tGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTg > 1:5018490/1‑60 (MQ=35) tGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTg > 1:7816000/1‑60 (MQ=35) tGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATggg > 1:6809811/1‑69 (MQ=35) aaaCCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCttt > 1:6653167/1‑56 (MQ=35) aaaCCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCttt > 1:4179325/1‑56 (MQ=35) aaCCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGc < 1:2629430/71‑1 (MQ=34) aaCCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGc < 1:1310610/71‑1 (MQ=34) aaCCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGc > 1:1082549/1‑71 (MQ=34) ccGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTc < 1:1763792/66‑1 (MQ=35) ccGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTc < 1:4107163/66‑1 (MQ=35) cGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCtt < 1:4625902/51‑1 (MQ=35) gtacgtacAAGCAGTGGGAGCACGCTTAGGCGTacacggtttcaggttctttttcactcccctcgccgg > 1:5017502‑M2/1‑33 (MQ=255) gtacgtacAAGCAGTGGGAGCACGCTTAGGCGTacacggtttcaggttctttttcactccactcgcc < 1:409489‑M2/67‑35 (MQ=255) tacgtacAAGCAGTGTGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTta > 1:3402752/1‑70 (MQ=25) tacgtacAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTta < 1:2787394/70‑1 (MQ=35) cgtacAAGCAGTGGGAGCATGCTTAGCCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTtata < 1:794234/70‑1 (MQ=25) gtacAAGCAGTGGGAGCATGCTTAGGCGTacacggtttcaggttctttttcactcccctcgccggggttct < 1:7452879‑M2/71‑43 (MQ=255) gtacAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCttt > 1:5324795/1‑45 (MQ=38) gtacAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATAtt > 1:1106597/1‑71 (MQ=34) gtacAAGCAGTGGGAGCACGCTTAGGCGTacacggtttcaggttctttttcactcccctcgcc > 1:4336951‑M2/1‑29 (MQ=255) gtacAAGCAGTGGGAGCACGCTTAGGCGTacacggtttcaggttctttttcactcccctcgcc > 1:4352168‑M2/1‑29 (MQ=255) tacAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAg < 1:6387031/59‑1 (MQ=35) tacAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAg < 1:6529289/59‑1 (MQ=35) tacAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAg < 1:7358497/59‑1 (MQ=35) acAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGta > 1:6609759/1‑47 (MQ=38) acAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCt > 1:425481/1‑71 (MQ=34) acAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCt > 1:2545282/1‑71 (MQ=34) acAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCt > 1:434832/1‑71 (MQ=34) cAAGCAGTGGGAGCACGCTTGTACGTacacggtttcaggttctttttcactcccctcgccggggttc < 1:7915282‑M2/67‑42 (MQ=255) aaGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTg > 1:6346096/1‑70 (MQ=35) gCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATaa > 1:696232/1‑46 (MQ=38) gCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAg > 1:566552/1‑71 (MQ=34) cAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGc < 1:421044/71‑1 (MQ=34) aGTGGGAGCATGCTTAGGCGTacacggtttcaggttctttttcactcccctcgccggg < 1:3922802‑M2/58‑38 (MQ=255) aGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCa < 1:6715772/71‑1 (MQ=34) tGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAg > 1:3568052/1‑71 (MQ=34) ggAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGt > 1:5912354/1‑71 (MQ=34) ggAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGt > 1:1472728/1‑71 (MQ=34) gAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATgg < 1:2363859/42‑1 (MQ=38) aGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTa < 1:2159529/71‑1 (MQ=34) gCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTaa < 1:2464687/71‑1 (MQ=34) cATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGc < 1:1725804/45‑1 (MQ=38) cATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGc < 1:3777794/45‑1 (MQ=38) cATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCt < 1:2376826/57‑1 (MQ=35) cATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAAc > 1:7446478/1‑71 (MQ=34) aTGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTtata < 1:5961458/52‑1 (MQ=33) aTGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTtata < 1:4428875/52‑1 (MQ=33) aTGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTtata < 1:1453310/52‑1 (MQ=33) aTGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTtata < 1:3326394/52‑1 (MQ=33) tGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGc < 1:764172/43‑1 (MQ=32) tGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAAcc > 1:3407065/1‑70 (MQ=31) tGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCg < 1:2513160/71‑1 (MQ=31) tGCTTAGGCCTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAAcc > 1:6518601/1‑70 (MQ=14) cGTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactgg > 1:4109692‑M2/1‑3 (MQ=255) cGTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactgg > 1:6628085‑M2/1‑3 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactggtt < 1:610381‑M2/71‑70 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactggtt > 1:7091357‑M2/1‑2 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactggtt < 1:6439687‑M2/71‑70 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactggtt > 1:3920862‑M2/1‑2 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactggtt > 1:6757674‑M2/1‑2 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactgg > 1:6734510‑M2/1‑2 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtact > 1:4912093‑M2/1‑2 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtact > 1:5194588‑M2/1‑2 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtact > 1:7819038‑M2/1‑2 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccct > 1:1978233‑M2/1‑2 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggtt < 1:2788560‑M2/42‑41 (MQ=255) gTacacggtttcaggttctttttcactcccctcgccggggtt < 1:5755934‑M2/42‑41 (MQ=255) gTacacggtttcaggttctttttcactcacctcgccggggttctt < 1:6182766‑M2/45‑44 (MQ=255) tacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctttccctcacggtactggttc > 1:6837164‑M2/1‑1 (MQ=255) tacacggtttcaggttctttttcactcccctcgccggggttcttttcgcctt < 1:2932515‑M2/52‑52 (MQ=255) tacacggtttcaggttctttttcactcccctcgccggggttcttt > 1:3575047‑M2/1‑1 (MQ=255) tacacggtttcaggttctttttcactcccctcgccggggtt < 1:3345546‑M2/41‑41 (MQ=255) tacacggtttcaggttctttttcactcccctcgccggg < 1:7307549‑M2/38‑38 (MQ=255) | CCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCATGCTTAGGCGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATATTCTGTAGCAAGGTTAACCGAATAGGGGAG > W3110S.gb/226242‑226380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |