| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 546084 | 71 (0.870) | 5 (0.070) | 3/84 | NT | 7.4% | coding (181/1668 nt) | fdrA | predicted acyl‑CoA synthetase with NAD(P)‑binding Rossmann‑fold domain |
| ? | W3110S.gb | = 546096 | 64 (0.920) | coding (193/1668 nt) | fdrA | predicted acyl‑CoA synthetase with NAD(P)‑binding Rossmann‑fold domain | |||||
CAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAA > W3110S.gb/546026‑546161 | cAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATAttt < 1:5369573/71‑1 (MQ=255)cAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATAttt < 1:2986217/71‑1 (MQ=255)cAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATAttt < 1:6512457/71‑1 (MQ=255) tAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTgcg > 1:6543574‑M2/1‑68 (MQ=255) aaGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTgcgt > 1:7347165‑M2/1‑66 (MQ=255) aGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTgcgtgg > 1:3862082‑M2/1‑65 (MQ=255) gCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTgcgtggc > 1:1959132‑M2/1‑64 (MQ=255) gTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCaa < 1:3469522/71‑1 (MQ=255) ttattaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAAt > 1:4026755/1‑71 (MQ=255) ttaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTgcgtg < 1:715449‑M2/63‑6 (MQ=255) ttaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCg > 1:4639431/1‑71 (MQ=255) ttaGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCg > 1:5939452/1‑71 (MQ=255) gATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAg < 1:7765866/71‑1 (MQ=255) aCCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCg > 1:6330867/1‑65 (MQ=255) aCCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCg > 1:6601504/1‑70 (MQ=255) cacaGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTgcgtgg < 1:5576948‑M2/56‑7 (MQ=255) cacaGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGGGTGGCAATTCGTAGCGAAg < 1:2592583/71‑1 (MQ=255) acaGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGt < 1:3963282/63‑1 (MQ=255) acaGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGt < 1:284702/63‑1 (MQ=255) caGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTgcgtgg < 1:6074838‑M2/54‑7 (MQ=255) caGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcg < 1:3898781/71‑1 (MQ=255) caGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcg < 1:4691074/71‑1 (MQ=255) aGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcg < 1:5400969/70‑1 (MQ=255) gTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTgcgtgg < 1:6314711‑M2/51‑7 (MQ=255) gTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTc < 1:3150011/57‑1 (MQ=255) gTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcg < 1:6898092/68‑1 (MQ=255) gTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcg < 1:7416720/68‑1 (MQ=255) tttCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGcggcgg < 1:5704900/71‑1 (MQ=255) tttCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGcggcgg < 1:3740264/71‑1 (MQ=255) tGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAAt < 1:7178990/50‑1 (MQ=255) gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTTGCAATTCGTAGCGAAGCGGCGGATGCgg > 1:4051161/1‑71 (MQ=255) gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAg > 1:748523/1‑54 (MQ=255) gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAg > 1:5958688/1‑54 (MQ=255) gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAg > 1:4220713/1‑54 (MQ=255) gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATg > 1:2383427/1‑68 (MQ=255) gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATg > 1:7400987/1‑68 (MQ=255) gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGc < 1:3548236/69‑1 (MQ=255) gCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCgg > 1:149949/1‑71 (MQ=255) cATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAg < 1:6741367/58‑1 (MQ=255) aTGACGATTTTAATAACGCCACGCCGAACGATATTTgcgt < 1:5805780‑M2/40‑5 (MQ=255) aTGACGATTTTAATAACGCCACGCCGAACGATATTTgcgt < 1:7887620‑M2/40‑5 (MQ=255) aTGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcggc < 1:4206581/61‑1 (MQ=255) aTGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCgggg < 1:5232669/71‑1 (MQ=255) tGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGa < 1:4989683/71‑1 (MQ=255) tGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGa < 1:462043/71‑1 (MQ=255) tGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGa < 1:2389113/71‑1 (MQ=255) gACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTa < 1:5908214/49‑1 (MQ=255) aCGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcgg < 1:784688/57‑1 (MQ=255) cGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCg > 1:3645870/1‑64 (MQ=255) cGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATcg > 1:5692378/1‑71 (MQ=255) gATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATcgc < 1:5100028/71‑1 (MQ=255) aTTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATcgcg < 1:2258276/71‑1 (MQ=255) tttAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAgcggc > 1:3530754/1‑53 (MQ=255) tttAATAACGCCACGCCGAACGATATTGGCGTGGCAATTCGTAGCGAAGCGGCGGa > 1:1053793/1‑56 (MQ=255) taataaCGCCACGCCGAACGATATTTGCGTGGCAATTCGTa > 1:4580291/1‑41 (MQ=255) taataaCGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAg < 1:3906318/70‑1 (MQ=255) ataaCGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCAGCGGATGCGGGGATCGCGCAGGc < 1:6277480/70‑1 (MQ=255) taaCGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCg > 1:3531907/1‑55 (MQ=255) taaCGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGa < 1:5447293/71‑1 (MQ=255) taaCGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGa < 1:5949250/71‑1 (MQ=255) taaCGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGa > 1:4951075/1‑71 (MQ=255) acgccacgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGAt > 1:6426799/1‑70 (MQ=255) cgccacgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTa > 1:2567756/1‑71 (MQ=255) cgccacgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTa > 1:6634509/1‑71 (MQ=255) gccacgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTa > 1:5203187/1‑70 (MQ=255) gccacgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTAt > 1:6367520/1‑71 (MQ=255) gccacgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTAt > 1:6376282/1‑71 (MQ=255) ccacgccGAACGATATTTgcgtggcgttattaaaatcgtcatgccagaaacctgtggtatctaat > 1:1187446‑M2/1‑18 (MQ=255) ccacgccGAACGATATTTgcgtggcgttattaaaatcgtcatgccagaaacctgtggt < 1:7555018‑M2/58‑41 (MQ=255) ccacgccGAACGATATTTgcgtggcgttattaaaatcgtcatgccagaaacctgtggt < 1:2803328‑M2/58‑41 (MQ=255) ccacgccGAACGATATTTgcgtggcgttattaaaatcgtcatgccagaaacctgtggt < 1:2087292‑M2/58‑41 (MQ=255) cacgccAAACGATATTTgcgtggcgttattaaaatcgtcatgccagaaacctgtggtatctaataacgctt < 1:5734‑M2/71‑55 (MQ=255) acgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATg > 1:5030019/1‑69 (MQ=255) acgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATg > 1:1552485/1‑69 (MQ=255) acgcaGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCATGCGATTATg > 1:775062/1‑69 (MQ=255) cgccGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATgcag < 1:2207483/71‑1 (MQ=255) cGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATgcagca < 1:7499450/70‑1 (MQ=255) cGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGcagcag > 1:5404164/1‑71 (MQ=255) gAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCagcagc < 1:6703273/71‑1 (MQ=255) gAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCagcagc > 1:6851489/1‑71 (MQ=255) gAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCagcagc < 1:4045845/71‑1 (MQ=255) aaCGATATTTGCGTGGCAATTCGTAGCGAAgcggcg < 1:1389754/36‑1 (MQ=255) cGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTg < 1:1684864/71‑1 (MQ=255) gATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGc < 1:1019908/53‑1 (MQ=255) gATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGa < 1:5794145/71‑1 (MQ=255) atatTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGaa < 1:3556237/71‑1 (MQ=255) | CAATAAAGCGTTATTAGATACCACAGGTTTCTGGCATGACGATTTTAATAACGCCACGCCGAACGATATTTGCGTGGCAATTCGTAGCGAAGCGGCGGATGCGGGGATCGCGCAGGCGATTATGCAGCAGCTTGAA > W3110S.gb/546026‑546161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |