| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 943798 = | 94 (1.150) | 7 (0.090) | 3/96 | NT | 7.8% | coding (2418/2445 nt) | dmsA | dimethyl sulfoxide reductase, anaerobic, subunit A |
| ? | W3110S.gb | 943824 = | 73 (0.920) | coding (2444/2445 nt) | dmsA | dimethyl sulfoxide reductase, anaerobic, subunit A | |||||
Only 100 of 110 total aligned reads displayed.
ACTCAACGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCT > W3110S.gb/943754‑943893 | aCTCAACGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTa < 1:3858824/71‑1 (MQ=255) tCAACGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAg > 1:1078899/1‑71 (MQ=255) aaCGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAgg < 1:7677009/70‑1 (MQ=255) aaCGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAgg < 1:6085600/70‑1 (MQ=255) aaCGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAg < 1:3532904/69‑1 (MQ=255) aaCGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAg > 1:5555959/1‑69 (MQ=255) aaCGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAg < 1:7136745/69‑1 (MQ=255) cgtccgtcTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAg > 1:7470389/1‑67 (MQ=255) cgtccgtcTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAg > 1:2800895/1‑70 (MQ=255) taaaaaatccatactgggttgtcatcggttactccttAAACCTTGTTCAGGTTGAAAAGGTGTa > 1:3016622‑M1/38‑64 (MQ=255) taaaaaatccatactgggttgtcatcggttactccttAAACCTTGTTCAGGTTGAAAAGGTGTa > 1:1072198‑M1/38‑64 (MQ=255) taaaaaatccatactgggttgtcatcggttactccttAAACCTTGTTCAGGTTGAAAAGGTGTa > 1:4729360‑M1/38‑64 (MQ=255) taaaaaatccatactgggttgtcatcggttactccttAAACCTTGTTCAGGTTGAAAAGGTGTa > 1:1766222‑M1/38‑64 (MQ=255) cgtcTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGa > 1:802456/1‑65 (MQ=255) cgtcTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAAcc < 1:6532157/71‑1 (MQ=255) cgtcTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAAcc < 1:4014967/71‑1 (MQ=255) cgtcTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAAcc > 1:7495491/1‑71 (MQ=255) tctcCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGa > 1:3557433/1‑71 (MQ=255) tcctcTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGa > 1:1678317/1‑61 (MQ=255) ccatactgggttgtcatcggttactccttAAACCTTGTTCAGGTTGAAAAGGTGTa > 1:1248471‑M1/30‑56 (MQ=255) atactgggttgtcatcggttactccttAAACCTTGTTCAGGTTGAAAAGGTGTAAg < 1:1055110‑M1/29‑1 (MQ=255) gCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAAcc < 1:7456610/70‑1 (MQ=255) tAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGt < 1:2812257/54‑1 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGt < 1:5976448/53‑1 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGt < 1:5841122/53‑1 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCg > 1:5552005/1‑58 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCg > 1:7860875/1‑58 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCg > 1:733118/1‑58 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCg > 1:1801343/1‑58 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCg > 1:7454154/1‑58 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAAc > 1:5676222/1‑66 (MQ=255) aaGGGGAATCCGTCACATACAAACCTTGTTCAGGGTGAAAAGGTGTAAGGAGt < 1:443428/53‑1 (MQ=255) aGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAg < 1:2204748/69‑1 (MQ=255) aGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAg < 1:1997433/69‑1 (MQ=255) aGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAg < 1:6657358/69‑1 (MQ=255) aGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTa > 1:1143545/1‑71 (MQ=255) ggggAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTaa > 1:2326734/1‑53 (MQ=255) ggggAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTaa > 1:34229/1‑53 (MQ=255) ggggAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTAt < 1:4555341/71‑1 (MQ=255) ggggAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTAt < 1:4699539/71‑1 (MQ=255) ggggAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTAt < 1:4997472/71‑1 (MQ=255) ggAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATgg < 1:6536408/71‑1 (MQ=255) gAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAgg < 1:3626886/45‑1 (MQ=255) gAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAgg < 1:3803984/45‑1 (MQ=255) gAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCg < 1:6032847/53‑1 (MQ=255) aTCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGt < 1:3394671/46‑1 (MQ=255) ccGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAAcc < 1:578144/48‑1 (MQ=255) ccGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAAcc < 1:2073261/48‑1 (MQ=255) ccGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAAcc < 1:2082396/48‑1 (MQ=255) ccGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGAtttt > 1:4603462/1‑71 (MQ=255) cGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATg < 1:7497339/51‑1 (MQ=255) cGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGAtttt < 1:6328817/70‑1 (MQ=255) gTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGa > 1:6028589/1‑48 (MQ=255) gTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGAtttttt < 1:1588764/71‑1 (MQ=255) tCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTa < 1:645895/71‑1 (MQ=255) tCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTa > 1:6149078/1‑71 (MQ=255) tCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTa < 1:7168094/71‑1 (MQ=255) acaTACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTAtt > 1:4165608/1‑71 (MQ=255) aTACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGa < 1:724913/71‑1 (MQ=255) cttacaccttttcaacctgaacaaggtttAAGGAGTAACCGATGACAACCCAGTAt < 1:1055110‑M2/27‑1 (MQ=255) cttacaccttttcaacctgaacaaggtttAAGGAGTAACCGATGACAACCCAGTATGGAttttt < 1:743192‑M2/35‑1 (MQ=255) aCAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGAtt > 1:5645489/1‑71 (MQ=255) aCAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGAtt > 1:6057414/1‑71 (MQ=255) aCAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATCGATTTTTTATTGAt > 1:5261275/1‑70 (MQ=255) tacaccttttcaacctgaacaaggtttAAGGAGTAACCGATGACAACCCAGTATgg > 1:1248471‑M2/28‑56 (MQ=255) tacaccttttcaacctgaacaaggtttAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTa > 1:4729360‑M2/28‑64 (MQ=255) tacaccttttcaacctgaacaaggtttAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTa > 1:3016622‑M2/28‑64 (MQ=255) tacaccttttcaacctgaacaaggtttAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTa > 1:1072198‑M2/28‑64 (MQ=255) cAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTc > 1:5421375/1‑71 (MQ=255) AAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTcc > 1:4243023‑M1/1‑71 (MQ=255) aaCCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAAcc < 1:6301072/36‑1 (MQ=255) aaCCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGa < 1:7520055/38‑1 (MQ=255) aCCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAg > 1:5573975/1‑71 (MQ=255) cTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGa > 1:7326796/1‑35 (MQ=255) cTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGa > 1:7216294/1‑35 (MQ=255) ttGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTAtt < 1:1749493/60‑1 (MQ=255) ttCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTg < 1:3012388/71‑1 (MQ=255) aGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGAtt > 1:1012529/1‑58 (MQ=255) aGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGAtt > 1:5865067/1‑58 (MQ=255) ggTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGa < 1:1235846/55‑1 (MQ=255) ttGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTc < 1:6490931/56‑1 (MQ=255) tGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAg > 1:102127/1‑58 (MQ=255) gAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGt < 1:5181320/70‑1 (MQ=255) gAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGACGTTGCACCGGtt > 1:2915335/1‑71 (MQ=255) aaaaGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTAtt < 1:1172682/48‑1 (MQ=255) aaaaGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCgg < 1:7298010/68‑1 (MQ=255) aaaaGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTg < 1:1423831/71‑1 (MQ=255) aaaGGTGTAAGGAGTAACCGATGACAACCCAGTAt > 1:2091847/1‑35 (MQ=255) aaaGGTGTAAGGAGTAACCGATGACAACCCAGTAt > 1:1255157/1‑35 (MQ=255) aaaGGTGTAAGGAGTAACCGATGACAACCCAGTAt > 1:4571040/1‑35 (MQ=255) aaGGTGTAAGGAGTAACCGATGACAACCCAGTATGGAttttt < 1:2016686/42‑1 (MQ=255) aaGGTGTAAGGAGTAACCGATGACAACCCAGTATGGAttttt < 1:269361/42‑1 (MQ=255) aGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCaa < 1:3984950/71‑1 (MQ=255) aGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCaa < 1:533126/71‑1 (MQ=255) aGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCaa < 1:1079176/71‑1 (MQ=255) ggTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCaa > 1:2142260/1‑70 (MQ=255) ggTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCaa > 1:461675/1‑70 (MQ=255) gtAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAAcc > 1:2040609/1‑71 (MQ=255) tAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAAcc < 1:3084524‑M2/69‑1 (MQ=255) tAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCt < 1:1738704‑M2/70‑1 (MQ=255) | ACTCAACGTCCGTCTCCTCTCGCTAAGGGGAATCCGTCACATACAAACCTTGTTCAGGTTGAAAAGGTGTAAGGAGTAACCGATGACAACCCAGTATGGATTTTTTATTGATTCCAGCCGTTGCACCGGTTGCAAAACCT > W3110S.gb/943754‑943893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |