| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 1356225 = | 89 (1.090) | 11 (0.150) | 3/88 | NT | 11.8% | coding (8/891 nt) coding (960/966 nt) |
sapC sapB |
predicted antimicrobial peptide transporter subunit predicted antimicrobial peptide transporter subunit |
| ? | W3110S.gb | 1356244 = | 84 (1.150) | coding (941/966 nt) | sapB | predicted antimicrobial peptide transporter subunit | |||||
Only 100 of 127 total aligned reads displayed.
CAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCA > W3110S.gb/1356174‑1356312 | cAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTAt > 1:5462004/1‑71 (MQ=255) aGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATg > 1:2649023/1‑71 (MQ=255) aGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATg < 1:7782791/71‑1 (MQ=255) ggCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGt > 1:5907529/1‑71 (MQ=255) ggCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGt > 1:6539930/1‑71 (MQ=255) gCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGtt < 1:5626541/71‑1 (MQ=255) aCGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCa > 1:6985305/1‑69 (MQ=255) cGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCagag > 1:5168989/1‑71 (MQ=255) cGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCaga < 1:3756694/70‑1 (MQ=255) gCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAgg > 1:3722630/1‑71 (MQ=255) gCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAgg < 1:4579269/71‑1 (MQ=255) cAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAggg > 1:7771288/1‑71 (MQ=255) gCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGt > 1:1542937/1‑70 (MQ=255) gCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGt > 1:2146663/1‑70 (MQ=255) cGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGtt < 1:6559027/60‑1 (MQ=255) gCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGc > 1:7502185/1‑70 (MQ=255) cccGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGcc < 1:6998939/70‑1 (MQ=255) cccGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCa < 1:5255759/71‑1 (MQ=255) cccGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCa > 1:3167963/1‑71 (MQ=255) ggcgggcgCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:1202339/71‑1 (MQ=255) ggcgggcgCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:6205172/71‑1 (MQ=255) cgcTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCaga < 1:4112370/52‑1 (MQ=255) ttttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaaa > 1:7933543/1‑71 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATg > 1:4403909/1‑41 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCa > 1:1133475/1‑63 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCa > 1:7601019/1‑63 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCa > 1:6925194/1‑63 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCa > 1:2269676/1‑63 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaaa > 1:1502828/1‑70 (MQ=255) tttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCaaaa > 1:537717/1‑70 (MQ=255) ttCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAata > 1:6257596/1‑71 (MQ=255) tCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCAt > 1:4107121/1‑57 (MQ=255) tCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATg > 1:7375090/1‑58 (MQ=255) tCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATCGCACCCAAAata > 1:1983710/1‑70 (MQ=255) cGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAatat < 1:7179959/70‑1 (MQ=255) cGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAatat < 1:6956019/70‑1 (MQ=255) cTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGc < 1:3904870/51‑1 (MQ=255) cTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGc < 1:4387902/51‑1 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCa > 1:5879490/1‑51 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCa > 1:2346354/1‑51 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:7508881/1‑58 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:2553280/1‑58 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:1354494/1‑58 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAc > 1:4924984/1‑57 (MQ=255) gTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAc > 1:6764942/1‑57 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCag > 1:2353742/1‑37 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAggg > 1:1864918/1‑41 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCa > 1:7194491/1‑65 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt > 1:3426331/1‑70 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt < 1:6383943/70‑1 (MQ=255) taCGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAAt > 1:4199714/1‑70 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:612516/36‑1 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:6937985/36‑1 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:3244070/36‑1 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:1333285/36‑1 (MQ=255) aCGCTATCGTAAGGCATACCATTCCTTATGTTTCag < 1:7036871/36‑1 (MQ=255) tATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCa < 1:4156881/67‑1 (MQ=255) tATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCa < 1:7066964/67‑1 (MQ=255) tATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCa < 1:2030991/67‑1 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:1668395/44‑1 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATgg < 1:6780605/44‑1 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTaa > 1:139694/1‑71 (MQ=255) tCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTa > 1:5903851/1‑70 (MQ=255) cGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTaa > 1:1792275/1‑70 (MQ=255) taaggaatggtatgccttaTGTTTCAGAGGGTTAGCCAt < 1:4200277‑M2/20‑1 (MQ=255) taaggaatggtatgccttaTGTTTCAGAGGGTTAGCCAt < 1:4318641‑M2/20‑1 (MQ=255) TAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACa < 1:4585053‑M1/70‑1 (MQ=255) aaggaatggtatgccttaTGTTTCAGAGGGTTAGCCATGGCACCCaaaa > 1:5620359‑M2/19‑49 (MQ=255) aaggaatggtatgccttaTGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCAc > 1:515810‑M2/19‑62 (MQ=255) aaggaatggtatgccttaTGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCAc > 1:1100721‑M2/19‑62 (MQ=255) AAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATTGCACCCAAAATATCAGAAATCACGTTAACa < 1:3796761‑M1/69‑1 (MQ=255) AAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACaa < 1:774174‑M1/70‑1 (MQ=255) AAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACaa < 1:6212277‑M1/70‑1 (MQ=255) AAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACaa < 1:6508527‑M1/70‑1 (MQ=255) aggaatggtatgccttaTGTTTCAGAGGGTTAGCCATgg > 1:7097144‑M2/18‑39 (MQ=255) aggaatggtatgccttaTGTTTCAGAGGGTTAGCCATgg > 1:5025723‑M2/18‑39 (MQ=255) aggaatggtatgccttaTGTTTCAGAGGGTTAGCCATgg > 1:262671‑M2/18‑39 (MQ=255) aggaatggtatgccttaTGTTTCAGAGGGTTAGCCATgg > 1:3056182‑M2/18‑39 (MQ=255) AGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACaata > 1:2377815‑M1/1‑71 (MQ=255) AGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACaat < 1:2903210‑M1/70‑1 (MQ=255) GGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAata > 1:124545‑M1/1‑49 (MQ=255) GCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAAc > 1:5357030‑M1/1‑65 (MQ=255) cATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATg < 1:4698069/71‑1 (MQ=255) aTACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCAcc > 1:4348391/1‑39 (MQ=255) aTACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAat < 1:4626301/45‑1 (MQ=255) aTACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAat < 1:3114923/45‑1 (MQ=255) aTACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGa > 1:5803501/1‑71 (MQ=255) aTACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGa > 1:6725930/1‑71 (MQ=255) tACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGAc < 1:1918699/71‑1 (MQ=255) ccATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGAc > 1:7068256/1‑69 (MQ=255) ccATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGAc > 1:8609/1‑69 (MQ=255) aTTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGt > 1:5425925/1‑71 (MQ=255) aTTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGt < 1:5625834/71‑1 (MQ=255) aTTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGt < 1:1529675/71‑1 (MQ=255) ttCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAatat < 1:529938/41‑1 (MQ=255) ttCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAat < 1:4026873/39‑1 (MQ=255) tCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGt < 1:868556/69‑1 (MQ=255) ccttaTGTTTCAGAGGGTTAGCCATGGCACCCaaa < 1:7895630‑M2/30‑1 (MQ=255) ccttaTGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAg > 1:5059177‑M2/6‑71 (MQ=255) aTGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCca < 1:2363232‑M2/69‑1 (MQ=255) | CAGGCGGTACGCAGCGTGCCCGGCGGGCGCTTTTCGCTGTATACGCTATCGTAAGGCATACCATTCCTTATGTTTCAGAGGGTTAGCCATGGCACCCAAAATATCAGAAATCACGTTAACAATAATGACCAGTGAGCCA > W3110S.gb/1356174‑1356312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |