BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 1509287	66 (0.810)	4 (0.050)	3/90	NT	5.6%	coding (793/1962 nt)	ydcP	predicted peptidase
*	?	W3110S.gb	= 1509300	73 (0.980)	4 (0.050)	3/90	NT	5.6%	coding (806/1962 nt)	ydcP	predicted peptidase

Only 100 of 112 total aligned reads displayed.

AAAGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACTTTC  >  W3110S.gb/1509230‑1509370

aaaGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGTAGAACg                                                                        <  1:1017548/71‑1 (MQ=255)

 aaGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGt                                                                       >  1:1146141‑M2/1‑70 (MQ=255)

 aaGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGt                                                                       >  1:7026734‑M2/1‑70 (MQ=255)

  aGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGtg                                                                      <  1:2983741‑M2/71‑3 (MQ=255)

  aGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGtg                                                                      <  1:5653417‑M2/71‑3 (MQ=255)

  aGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGt                                                                       >  1:2864185‑M2/1‑69 (MQ=255)

  aGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGt                                                                       <  1:3795698‑M2/70‑2 (MQ=255)

         aGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCt                                                               >  1:2460285/1‑71 (MQ=255)

          gCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATc                                                                <  1:4511589/69‑1 (MQ=255)

             aCGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGgcg                                                           >  1:5062275/1‑71 (MQ=255)

             aCGTGAAGAATATCACCGCCCATTATAGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGgcg                                                           >  1:5238753/1‑71 (MQ=255)

              cGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGgcg                                                           <  1:7205978/70‑1 (MQ=255)

               gTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGtggct                                                                   >  1:6992907‑M2/1‑56 (MQ=255)

               gTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCg                                                                   <  1:4628729/61‑1 (MQ=255)

               gTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGgcgcg                                                         <  1:4660330/71‑1 (MQ=255)

                tGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGgc                                                            <  1:6621690/67‑1 (MQ=255)

                  aagaaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGt                                                                       >  1:2985734‑M2/1‑53 (MQ=255)

                  aagaaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTgg                                                             <  1:82606/64‑1 (MQ=255)

                  aagaaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGgcgcgcg                                                       <  1:7756690/70‑1 (MQ=255)

                   agaaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATc                                                                <  1:7597195/60‑1 (MQ=255)

                   agaaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCt                                                     >  1:4644025/1‑71 (MQ=255)

                   agaaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCt                                                     <  1:7483625/71‑1 (MQ=255)

                    gaaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCg                                                                   <  1:2710255/56‑1 (MQ=255)

                    gaaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCg                                                                   <  1:1646634/56‑1 (MQ=255)

                     aaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAGCGtg                                                                      <  1:1303921‑M2/52‑3 (MQ=255)

                     aaTATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGtg                                                                      <  1:2853631‑M2/52‑3 (MQ=255)

                      atatCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtc                                                   <  1:1609527/70‑1 (MQ=255)

                      atatCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtc                                                   <  1:1511618/70‑1 (MQ=255)

                       tatCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtcat                                                 >  1:5799988/1‑71 (MQ=255)

                       tatCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtcat                                                 <  1:3113663/71‑1 (MQ=255)

                       tatCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtcat                                                 <  1:7660782/71‑1 (MQ=255)

                       tatCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtcat                                                 >  1:2959831/1‑71 (MQ=255)

                         tCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTgg                                                             >  1:4240081/1‑57 (MQ=255)

                         tCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtcatc                                                <  1:2672034/70‑1 (MQ=255)

                         tCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtcatc                                                <  1:3800842/70‑1 (MQ=255)

                         tCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtcat                                                 >  1:7876287/1‑69 (MQ=255)

                         tCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtcat                                                 >  1:7348236/1‑69 (MQ=255)

                           acagCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAgg                                             >  1:3852313/4‑71 (MQ=255)

                           aCCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAgg                                             <  1:254639/71‑1 (MQ=255)

                           aCCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAgg                                             <  1:3644439/71‑1 (MQ=255)

                              gCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCg                                          <  1:2337612/71‑1 (MQ=255)

                               cccATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCg                                          >  1:7332536/1‑70 (MQ=255)

                                   ttATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAgg                                             <  1:1685675/63‑1 (MQ=255)

                                   ttATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACt                                      >  1:7166363/1‑70 (MQ=255)

                                    tATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTg                                     >  1:5482325/1‑70 (MQ=255)

                                    tATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTg                                     >  1:6986132/1‑70 (MQ=255)

                                     aTCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCt                                                     <  1:3285336/53‑1 (MQ=255)

                                     aTCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtc                                                   <  1:5726734/55‑1 (MQ=255)

                                     aTCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtc                                                   <  1:3940301/55‑1 (MQ=255)

                                     aTCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTtc                                                   <  1:6748415/55‑1 (MQ=255)

                                           aGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTc                             <  1:4735237/71‑1 (MQ=255)

                                             aTGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCtt                           >  1:3794200/1‑71 (MQ=255)

                                              tGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCttt                          <  1:5938482/71‑1 (MQ=255)

                                                cTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCTCGCTTCATCAGGTCGTACTGAACATTTCTTTGt                        <  1:7921650/71‑1 (MQ=255)

                                                cTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGt                        <  1:720216/71‑1 (MQ=255)

                                                   gATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTc                      >  1:4785630/1‑70 (MQ=255)

                                                   gATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTc                      >  1:7539425/1‑70 (MQ=255)

                                                    aTGCCATTATTGAAGAACGtggcatcaagcatctggcgataatgggcgg                                          >  1:5614952‑M2/1‑19 (MQ=255)

                                                    aTGCCATTATTGAAGAACGtggcatcaagcatctggcgataatgggcgg                                          >  1:4739256‑M2/1‑19 (MQ=255)

                                                    aTGCCATTATTGAAGAACGtggcatcaagcatctggcgataatgggcg                                           >  1:3298259‑M2/1‑19 (MQ=255)

                                                    aTGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTcc                     <  1:3424467/70‑1 (MQ=255)

                                                     tGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAAc                                  >  1:411259/1‑56 (MQ=255)

                                                     tGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCAt                   >  1:2396475/1‑71 (MQ=255)

                                                      gCCATTATTGAAGAACGtggcatcaagcatctggcgataatgggcggtg                                        <  1:4391081‑M2/49‑33 (MQ=255)

                                                       ccATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCg                 <  1:6919231/71‑1 (MQ=255)

                                                       ccATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCg                 <  1:4578253/71‑1 (MQ=255)

                                                        cATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGa                >  1:7609475/1‑71 (MQ=255)

                                                        cATTATTGAAGAACGTGGCGATCTGGCGCGAGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGa                >  1:7587126/1‑71 (MQ=255)

                                                         attattGAAGAACGTGGCGATCTGGCGCGCGCTTCATCATGTCGTACt                                      <  1:2178172/48‑1 (MQ=255)

                                                         attattGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGAc               <  1:4796825/71‑1 (MQ=255)

                                                          ttattGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACg              >  1:1220565/1‑71 (MQ=255)

                                                           tattGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTTCATCGACg              <  1:6396582/70‑1 (MQ=255)

                                                            attGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACgg             <  1:880192/70‑1 (MQ=255)

                                                             ttGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGaa           <  1:6065588/71‑1 (MQ=255)

                                                             ttGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGaa           <  1:7441277/71‑1 (MQ=255)

                                                             ttGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGa            <  1:2600677/70‑1 (MQ=255)

                                                             ttGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGa            <  1:874221/70‑1 (MQ=255)

                                                             ttGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGa            <  1:3350537/70‑1 (MQ=255)

                                                             ttGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGa            >  1:6308365/1‑70 (MQ=255)

                                                             ttGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGa            <  1:3788387/70‑1 (MQ=255)

                                                                aagaaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACAttt                              <  1:3963837/49‑1 (MQ=255)

                                                                aagaaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACAttt                              <  1:6676574/49‑1 (MQ=255)

                                                                aagaaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCt                            <  1:3175289/51‑1 (MQ=255)

                                                                 agaaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACAttt                              <  1:7851423/48‑1 (MQ=255)

                                                                 agaaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAg        >  1:6389432/1‑70 (MQ=255)

                                                                 agaaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGa       <  1:146148/71‑1 (MQ=255)

                                                                   aaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCt                            <  1:5154970/48‑1 (MQ=255)

                                                                   aaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCt                            <  1:5016024/48‑1 (MQ=255)

                                                                   aaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACt     <  1:7460386/71‑1 (MQ=255)

                                                                   aaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACt     <  1:399354/71‑1 (MQ=255)

                                                                   aaCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACt     <  1:5375822/71‑1 (MQ=255)

                                                                    aCGTGGCGATCTGTCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACtt    >  1:3585413/1‑71 (MQ=255)

                                                                    aCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACtt    >  1:2224244/1‑71 (MQ=255)

                                                                    aCGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACtt    >  1:851782/1‑71 (MQ=255)

                                                                    aCGTGGCGATCTGGCGCGCGCTTCATAAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACtt    >  1:2490713/1‑71 (MQ=255)

                                                                     cGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAg        <  1:4878421/66‑1 (MQ=255)

                                                                     cGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACttt   >  1:6755508/1‑71 (MQ=255)

                                                                     cGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACttt   >  1:3458317/1‑71 (MQ=255)

                                                                     cGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGAAttt   >  1:5854118/1‑71 (MQ=255)

                                                                      gTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACTTTc  <  1:2217952/71‑1 (MQ=255)

AAAGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGCCAGATGCTTGATGCCATTATTGAAGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACTTTC  >  W3110S.gb/1509230‑1509370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.