| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1523049 | 102 (1.250) | 13 (0.170) | 5/92 | NT | 12.5% | coding (1731/2103 nt) | yncD | predicted iron outer membrane transporter |
| ? | W3110S.gb | = 1523065 | 86 (1.130) | coding (1715/2103 nt) | yncD | predicted iron outer membrane transporter | |||||
Only 100 of 138 total aligned reads displayed.
ACGGGCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTCAGCGCC > W3110S.gb/1522995‑1523135 | aCGGGCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCAt > 1:934127/1‑71 (MQ=255)aCGGGCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCAt > 1:5285024/1‑71 (MQ=255)aCGGGCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCAt > 1:7074324/1‑71 (MQ=255) cGGGCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATc > 1:6864041‑M2/1‑70 (MQ=255) ggCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATcaa > 1:4827075‑M2/1‑68 (MQ=255) ggCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATcaa > 1:3345911‑M2/1‑68 (MQ=255) gCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAg < 1:6557444/71‑1 (MQ=255) cGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGc > 1:4111509/1‑71 (MQ=255) cGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGc < 1:2867194/71‑1 (MQ=255) cGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGc < 1:7116623/71‑1 (MQ=255) aTCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATc > 1:6035542‑M2/1‑64 (MQ=255) aTCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATc > 1:3999337‑M2/1‑64 (MQ=255) tCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAg > 1:5100835/1‑71 (MQ=255) cTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTc < 1:6049957/71‑1 (MQ=255) cTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTc < 1:2408894/71‑1 (MQ=255) cTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTc > 1:2700395/1‑71 (MQ=255) tGGCATCCGATTACCGTTACAATCCTGATCATTGCAAACATTGCTGCGATAGGTCGCATCAAGcc > 1:5490409/1‑65 (MQ=255) ggCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTc > 1:2671160/1‑69 (MQ=255) ggCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTc > 1:3048740/1‑69 (MQ=255) gCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTACTGCGATAGGTCGCATCAAGCCAGGTCCAg > 1:6991186/1‑71 (MQ=255) tCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATc > 1:627505‑M2/1‑54 (MQ=255) ccGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGAcg > 1:4152682/1‑71 (MQ=255) aTTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGcc > 1:7098017/1‑56 (MQ=255) aTTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGcc > 1:2049737/1‑56 (MQ=255) ttACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGtt < 1:4143085/71‑1 (MQ=255) ttACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGtt > 1:3860138/1‑71 (MQ=255) tACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGc > 1:420393/1‑53 (MQ=255) tACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGc > 1:533532/1‑53 (MQ=255) tACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGtt > 1:7333864/1‑70 (MQ=255) aCCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGa > 1:3464378/1‑63 (MQ=255) aCCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGttt < 1:5198711/70‑1 (MQ=255) aCCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGttt < 1:2791371/70‑1 (MQ=255) cGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATca > 1:1111418‑M2/1‑45 (MQ=255) ttACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATcaa < 1:2591856‑M2/46‑4 (MQ=255) ttACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAg > 1:3480202/1‑47 (MQ=255) ttACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTAcgc > 1:5897191/1‑70 (MQ=255) ttACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTAc < 1:4844379/68‑1 (MQ=255) aCAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGcc < 1:4765807/47‑1 (MQ=255) aCAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAg > 1:3327352/1‑55 (MQ=255) aCAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAg > 1:3165391/1‑55 (MQ=255) aCAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGa < 1:3716556/70‑1 (MQ=255) cAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGaaa < 1:4641938/71‑1 (MQ=255) cAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGaa < 1:2037220/70‑1 (MQ=255) aTCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAAt < 1:802496/71‑1 (MQ=255) tCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTc < 1:3598211/48‑1 (MQ=255) tCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGttt > 1:5874659/1‑60 (MQ=255) tCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTAcgc > 1:6243332/1‑64 (MQ=255) tCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTAcgc > 1:4920267/1‑64 (MQ=255) tCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTAcgc > 1:2316886/1‑64 (MQ=255) tCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAAtc > 1:3252472/1‑71 (MQ=255) tCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAAtc > 1:5181991/1‑71 (MQ=255) tCCTGTTCATTACAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTAcgc > 1:2751487/1‑64 (MQ=255) cTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCa > 1:3369163/1‑42 (MQ=255) ttCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAAt < 1:4007211/65‑1 (MQ=255) ttCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCt < 1:5807773/70‑1 (MQ=255) cATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAg > 1:7883900/1‑44 (MQ=255) cATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAg > 1:3118446/1‑44 (MQ=255) ttGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGa > 1:6299821/1‑70 (MQ=255) gCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAg < 1:1187248/40‑1 (MQ=255) gCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAg < 1:3897594/40‑1 (MQ=255) gCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTa < 1:5653185/50‑1 (MQ=255) cAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACg < 1:5232420/71‑1 (MQ=255) aaaCATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAAt < 1:7768652/57‑1 (MQ=255) aaCATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGtt < 1:7749075/71‑1 (MQ=255) aCATTGCTGCGATAGGTCGCATcaatgtttgcaatgaacaggattgtaaggtaatcggatgccagggatcg < 1:2148925‑M2/71‑50 (MQ=255) aCATTGCTGCGATAGGTCGCATcaatgtttgcaatgaacaggattgtaacggtaatcggatgccagggatc < 1:1649321‑M2/71‑50 (MQ=255) aCATTGCTGCGATAGGTCGCATcaatgtttgcaatgaacaggattgtaacggtaatcggatgccagggatc < 1:5211665‑M2/71‑50 (MQ=255) aCATTGCTGCGATAGGTCGCATcaatgtttgcaatgaacaggattgtaacggtaatcggatgccagggatc < 1:6215447‑M2/71‑50 (MQ=255) aCATTGCTGCGATAGGTCGCATcaatgtatgcaatgaacaggattgtaacggtaatcggatgccagggatc < 1:2374050‑M2/71‑50 (MQ=255) aCATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTa < 1:1287424/46‑1 (MQ=255) aCATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTa < 1:6188426/46‑1 (MQ=255) aCATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTa < 1:182245/46‑1 (MQ=255) aCATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTg < 1:6879748/71‑1 (MQ=255) aCATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTg < 1:544411/71‑1 (MQ=255) aCATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTg < 1:2848333/71‑1 (MQ=255) cATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGa > 1:5173873/1‑71 (MQ=255) cATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGa < 1:4202576/71‑1 (MQ=255) ttGCTGCGATAGGTCGCATcaatgtttgcaatgaacaggattgtaacggtaa > 1:3297416‑M2/1‑19 (MQ=255) tgctgcGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGa > 1:7886865/1‑60 (MQ=255) gctgcGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATcc < 1:231132/70‑1 (MQ=255) ctgcGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATccc < 1:117309/70‑1 (MQ=255) ctgcGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCa < 1:6734389/71‑1 (MQ=255) gcGATAGGTCGCATcaatgtttgcaatgaacaggattgtaacggt > 1:418029‑M2/1‑14 (MQ=255) gcGATAGGTCGCATcaatgtttgcaatgaacagga > 1:7394407‑M2/1‑14 (MQ=255) cGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGc < 1:7896681/71‑1 (MQ=255) aTAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGc > 1:6638016/1‑69 (MQ=255) tAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAg < 1:5006450/71‑1 (MQ=255) ggTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGtt < 1:2724161/71‑1 (MQ=255) ggTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGtt < 1:7166035/71‑1 (MQ=255) gTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTc < 1:4444635/71‑1 (MQ=255) tCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGtt < 1:6660627/69‑1 (MQ=255) cGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTCAg > 1:5023131/1‑71 (MQ=255) gCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGa < 1:3919567/46‑1 (MQ=255) gCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGtt < 1:146159/67‑1 (MQ=255) gCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTCAgc > 1:318871/1‑71 (MQ=255) gCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTCAgc > 1:1867717/1‑71 (MQ=255) cATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTCAgcg < 1:5358382/71‑1 (MQ=255) aTCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTCAgcgc > 1:5283898/1‑71 (MQ=255) tCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTg < 1:2277465/50‑1 (MQ=255) tCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTCAGCGcc > 1:753960/1‑71 (MQ=255) | ACGGGCGATCCCTGGCATCCGATTACCGTTACAATCCTGTTCATTGCAAACATTGCTGCGATAGGTCGCATCAAGCCAGGTCCAGGACGCGTTTACGCGAAAATCTCCTGCGAAACGTTGATCCCATGCCAGTTCAGCGCC > W3110S.gb/1522995‑1523135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |