| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1609747 | 60 (0.740) | 3 (0.050) | 3/80 | NT | 5.4% | coding (688/759 nt) | tam | trans‑aconitate methyltransferase |
| ? | W3110S.gb | = 1609766 | 56 (0.840) | coding (707/759 nt) | tam | trans‑aconitate methyltransferase | |||||
CAGCAGCTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCACGTCAGCTGGTA > W3110S.gb/1609699‑1609836 | cagcagCTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAga < 1:7184696‑M2/70‑3 (MQ=255)cagcagCTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAga < 1:6057060‑M2/70‑3 (MQ=255) cagcTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAgatact < 1:3632434‑M2/71‑7 (MQ=255) gcTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAgata < 1:6786160‑M2/67‑5 (MQ=255) cTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAgatactgct < 1:3935992‑M2/71‑10 (MQ=255) ttttCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTgg > 1:2904017/1‑71 (MQ=255) ttttCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTgg > 1:6942034/1‑71 (MQ=255) tttCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATActgctg < 1:5209012/69‑1 (MQ=255) tttCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATActgctg < 1:5435853/69‑1 (MQ=255) ttCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCa > 1:5259159/1‑71 (MQ=255) aaGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCAtt < 1:913866/68‑1 (MQ=255) aaGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCAtt < 1:892056/68‑1 (MQ=255) aGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTcc < 1:3537520/70‑1 (MQ=255) aGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTcc < 1:4788282/70‑1 (MQ=255) aGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTcc < 1:6300220/70‑1 (MQ=255) aGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTcc < 1:6690945/70‑1 (MQ=255) cgcTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCcgcg < 1:4314361/71‑1 (MQ=255) gcTACCCTCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGt > 1:13286/1‑71 (MQ=255) ccATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCt < 1:2754698/69‑1 (MQ=255) cATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACac > 1:6816613/1‑44 (MQ=255) cATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAg < 1:784840‑M2/45‑2 (MQ=255) aTCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGGATTTCCGCGTc > 1:6560235/1‑66 (MQ=255) tCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGttt < 1:1359511/70‑1 (MQ=255) tCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTa > 1:511622/1‑71 (MQ=255) tCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTa < 1:1232230/71‑1 (MQ=255) tCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGAATTTCCGCGTCTGTTTa < 1:7885889/71‑1 (MQ=255) aGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATActgctg > 1:2208908/1‑50 (MQ=255) aGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATActgctg > 1:2544912/1‑50 (MQ=255) aGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATActgctg > 1:5549695/1‑50 (MQ=255) aGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATActgctg > 1:1866186/1‑50 (MQ=255) aGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATActgctg > 1:6758618/1‑50 (MQ=255) aGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAtt > 1:2307633/1‑71 (MQ=255) aGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAtt > 1:1421780/1‑71 (MQ=255) aGATGCGGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAtt > 1:1026901/1‑71 (MQ=255) gATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAttg < 1:539815/71‑1 (MQ=255) aTGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGt < 1:7494962/60‑1 (MQ=255) tGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCAttt < 1:1656127/53‑1 (MQ=255) tGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCAttt < 1:2188737/53‑1 (MQ=255) tGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTcc > 1:1520926/1‑55 (MQ=255) cTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTcc > 1:5938712/1‑53 (MQ=255) cTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAttgttg < 1:4886492/70‑1 (MQ=255) cTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGc < 1:6102795/71‑1 (MQ=255) gAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCt < 1:5386926/56‑1 (MQ=255) gAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCg > 1:6033785/1‑71 (MQ=255) gAAGACCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCAt > 1:3048224/1‑46 (MQ=255) aaGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCgg > 1:5348166/1‑71 (MQ=255) agagCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGc > 1:2192773/1‑71 (MQ=255) cAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTAt < 1:7844281/71‑1 (MQ=255) aGTATCCACTGCAAGAGAACGGACAgatactgcacttccagcatctgatggtagcgcttaagaaaaagct < 1:3528451‑M2/70‑46 (MQ=255) aGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATg < 1:5734152/71‑1 (MQ=255) gTATCCACTGCAAGAGAACGGACAgatactgctcttccagcatct < 1:974330‑M2/45‑22 (MQ=255) gTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCgg < 1:7302941/64‑1 (MQ=255) gTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATg > 1:2974233/1‑70 (MQ=255) gTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATg < 1:6538933/70‑1 (MQ=255) tATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAttgt < 1:6385040/56‑1 (MQ=255) aTCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAg > 1:2616277/1‑71 (MQ=255) tCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCGGCGTCTGTTTAttgttg > 1:4768950/1‑56 (MQ=255) tCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAttgttg > 1:1426470/1‑56 (MQ=255) tCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCAGCGTCTGTTTAttgttg > 1:4760022/1‑56 (MQ=255) cACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATTGAGTa < 1:4426295/70‑1 (MQ=255) cTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTaaa > 1:5463262/1‑70 (MQ=255) tGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAtt < 1:2744634/47‑1 (MQ=255) tGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTAtt < 1:3915357/47‑1 (MQ=255) tGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAata > 1:7918400/1‑71 (MQ=255) tGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAata > 1:2783987/1‑71 (MQ=255) cAAGAGAACGGACAgatactgctcttccagcatctgatggtagcgcttaagaaaaagctgctgttcgctc > 1:3863545‑M2/1‑14 (MQ=255) cAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGttt > 1:3889754/1‑42 (MQ=255) cAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAatat > 1:3274741/1‑70 (MQ=255) cAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAatat < 1:16802/70‑1 (MQ=255) cAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAatat > 1:4336657/1‑70 (MQ=255) cAAGAGAACGGACAGATACTGCTGGAATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAatat < 1:4167413/70‑1 (MQ=255) aaGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCa < 1:1710944/71‑1 (MQ=255) agagAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCAc > 1:1759799/1‑71 (MQ=255) agaACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCACGt < 1:6411265/71‑1 (MQ=255) agaACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCACGt < 1:3540669/71‑1 (MQ=255) cGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGccc > 1:1287215/1‑44 (MQ=255) cGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGcc > 1:641079/1‑43 (MQ=255) gACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCACGTCAGCTg > 1:6685669/1‑71 (MQ=255) gACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCACGTCAGCTg < 1:869351/71‑1 (MQ=255) aGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCACGTCAGCTGGTa < 1:4867776/71‑1 (MQ=255) | CAGCAGCTTTTTCTTAAGCGCTACCATCAGATGCTGGAAGAGCAGTATCCACTGCAAGAGAACGGACAGATACTGCTGGCATTTCCGCGTCTGTTTATTGTTGCCCGGCGTATGGAGTAAATATCACGTCAGCTGGTA > W3110S.gb/1609699‑1609836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |