| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3473734 = | 93 (1.140) | 7 (0.100) | 5/84 | NT | 9.4% | coding (324/1101 nt) | trmA | tRNA (uracil‑5‑)‑methyltransferase |
| ? | W3110S.gb | 3473761 = | 56 (0.800) | coding (351/1101 nt) | trmA | tRNA (uracil‑5‑)‑methyltransferase | |||||
GTGTGCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGCCCTGCGC > W3110S.gb/3473691‑3473830 | gtgtGCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAg < 1:3757095/71‑1 (MQ=255)gtgtGCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAg > 1:7083357/1‑71 (MQ=255) tgtgCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAgg < 1:2865185/71‑1 (MQ=255) tgtgCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAgg < 1:7796886/71‑1 (MQ=255) gTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCggtg < 1:279232/71‑1 (MQ=255) gTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCggtg < 1:4101127/71‑1 (MQ=255) aataatCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCggtggt > 1:5744594/1‑71 (MQ=255) aataatCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCggtggt > 1:5753673/1‑71 (MQ=255) ataatCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGtt > 1:6774422/1‑71 (MQ=255) taatCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGttt > 1:5637253/1‑71 (MQ=255) taatCCCGTTCTGCGCCAAAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGttt > 1:1487509/1‑71 (MQ=255) taatACCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGttt > 1:103730/1‑71 (MQ=255) aatCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCggttgt < 1:5269297/68‑1 (MQ=255) atCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTcc > 1:3611471/1‑71 (MQ=255) atCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTc < 1:2196451/70‑1 (MQ=255) cccGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTccc < 1:6333764/70‑1 (MQ=255) ccGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTg > 1:1544470/1‑71 (MQ=255) ccGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTg > 1:3821073/1‑71 (MQ=255) cGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGc < 1:7204954/71‑1 (MQ=255) cGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGc < 1:4655328/71‑1 (MQ=255) ttCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTccc < 1:3043532/66‑1 (MQ=255) tCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCta > 1:7360386/1‑70 (MQ=255) cgcCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATAcc < 1:6052374/70‑1 (MQ=255) cgcCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCa > 1:4258544/1‑71 (MQ=255) ccACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCAt > 1:5779496/1‑70 (MQ=255) cacaAGTTGTTCCAGATTGATTACCTCACTATACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCAt > 1:2263921/1‑69 (MQ=255) cacaAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATa < 1:7019666/70‑1 (MQ=255) acaAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGttt > 1:792330/1‑54 (MQ=255) acaAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCAt > 1:1454149/1‑68 (MQ=255) acaAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCAt > 1:7448361/1‑68 (MQ=255) caAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATaag > 1:4203219/1‑70 (MQ=255) aaGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATaag > 1:4520714/1‑69 (MQ=255) aGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTcc > 1:325758/1‑53 (MQ=255) gttgttCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGc > 1:6298216/1‑56 (MQ=255) gttgttCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGc > 1:2864740/1‑56 (MQ=255) ttCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGga < 1:6732987/71‑1 (MQ=255) ccAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGgat > 1:599731/1‑70 (MQ=255) cAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGgatg < 1:7449800/70‑1 (MQ=255) aGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGc > 1:7484842/1‑48 (MQ=255) aGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGc < 1:5585962/48‑1 (MQ=255) gattgattACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGc < 1:3452477/47‑1 (MQ=255) gattgattACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGgatgat < 1:7285189/70‑1 (MQ=255) attgattACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGgatga < 1:128520/68‑1 (MQ=255) ttgattACCTCACTACACTGAGTAATCAGGCGGTGGTTTc > 1:673172/1‑40 (MQ=255) ttgattACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAg < 1:6916659/71‑1 (MQ=255) tgattactcagtgtagtgaggtaatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGt > 1:3084780‑M2/28‑71 (MQ=255) TGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAg < 1:7773856‑M1/70‑1 (MQ=255) TGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAg < 1:7035363‑M1/70‑1 (MQ=255) TGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGt < 1:1915847‑M1/71‑1 (MQ=255) TGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGt < 1:1898563‑M1/71‑1 (MQ=255) TGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGt < 1:435819‑M1/71‑1 (MQ=255) ATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTg < 1:430409‑M1/70‑1 (MQ=255) TTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGc > 1:2492945‑M1/1‑41 (MQ=255) TACCTCACTACACTGAGTAATCAGGCGGTGGTTTcc < 1:7599410‑M1/36‑1 (MQ=255) ACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGgatg < 1:4503365‑M1/60‑1 (MQ=255) ACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGAtgatga < 1:3593333‑M1/64‑1 (MQ=255) ACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGt < 1:4333266‑M1/71‑1 (MQ=255) ctcagtgtagtgaggtaatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGc < 1:4609300‑M2/32‑1 (MQ=255) CCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGt > 1:1615822‑M1/1‑70 (MQ=255) CCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTc > 1:231273‑M1/1‑71 (MQ=255) tcagtgtagtgaggtaatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGc < 1:7714319‑M2/32‑1 (MQ=255) cTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCa < 1:7528219/71‑1 (MQ=255) cagtgtagtgaggtaatcaGGCGGTGGTTTCCCTg > 1:1855301‑M2/20‑35 (MQ=255) cACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAg > 1:5160780/1‑70 (MQ=255) aCTATACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGa < 1:1123650/71‑1 (MQ=255) aCTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGc > 1:2851676/1‑49 (MQ=255) aCTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAgg < 1:211632/70‑1 (MQ=255) aCTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAgg < 1:5750950/70‑1 (MQ=255) aCTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGa < 1:1500244/71‑1 (MQ=255) aCTACACTGAGTAATCAGGCGGGGGTTTCCCTGCTATACCATAAGAAGCTGgatgat < 1:7351230/57‑1 (MQ=255) cTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAgg > 1:7677128/1‑69 (MQ=255) tACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTg > 1:1204586/1‑49 (MQ=255) tACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTg > 1:4185656/1‑49 (MQ=255) gtagtgaggtaatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTg < 1:4945731‑M2/45‑1 (MQ=255) acacTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGc > 1:7517725/1‑71 (MQ=255) cacTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAg > 1:2883007/1‑56 (MQ=255) cacTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAg > 1:1420166/1‑56 (MQ=255) cacTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCg < 1:7833753/71‑1 (MQ=255) agtgaggtaatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGc > 1:7585881‑M2/14‑60 (MQ=255) agtgaggtaatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGc > 1:762753‑M2/14‑60 (MQ=255) acTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCg > 1:4347859/1‑70 (MQ=255) cTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGa < 1:6629808/71‑1 (MQ=255) tGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAg > 1:273830/1‑71 (MQ=255) gAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTg < 1:5186680/43‑1 (MQ=255) gAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTg < 1:4170672/43‑1 (MQ=255) gAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTg < 1:4417579/43‑1 (MQ=255) aGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGc < 1:5673382/71‑1 (MQ=255) taatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGccc < 1:3273377‑M2/65‑1 (MQ=255) taatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGccc < 1:2330923‑M2/65‑1 (MQ=255) taatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGccc > 1:4622880‑M2/7‑71 (MQ=255) aatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTg > 1:724350‑M2/6‑39 (MQ=255) aatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTg > 1:5840232‑M2/6‑39 (MQ=255) aatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTg > 1:7290827‑M2/6‑39 (MQ=255) aatcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGt > 1:4177314‑M2/6‑49 (MQ=255) atcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGCCCTg < 1:4493010‑M2/67‑1 (MQ=255) tcaGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCa < 1:329345‑M2/51‑1 (MQ=255) caGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAg > 1:2587069‑M2/3‑58 (MQ=255) aGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGCCCTgcgc < 1:732550‑M2/70‑1 (MQ=255) | GTGTGCGTAATAATCCCGTTCTGCGCCACAAGTTGTTCCAGATTGATTACCTCACTACACTGAGTAATCAGGCGGTGGTTTCCCTGCTATACCATAAGAAGCTGGATGATGAGTGGCGTCAGGAAGCGGAGGCCCTGCGC > W3110S.gb/3473691‑3473830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |