| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3563016 = | 50 (0.610) | 5 (0.070) | 4/84 | NT | 7.9% | intergenic (‑74/‑94) | yihV/yihU | predicted sugar kinase/predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
| ? | W3110S.gb | 3563049 = | 74 (1.060) | intergenic (‑107/‑61) | yihV/yihU | predicted sugar kinase/predicted oxidoreductase with NAD(P)‑binding Rossmann‑fold domain | |||||
Only 100 of 120 total aligned reads displayed.
TTCACCAATTGTTTAAAAAGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGGCAG > W3110S.gb/3562982‑3563116 | ttGTTTAAAAAGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACaagca > 1:1624811/1‑69 (MQ=255) gTTTAAAAAGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACaagcaaag < 1:2835560/70‑1 (MQ=255) tttAAAAAGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACaagcaaagca < 1:7201492/71‑1 (MQ=255) tttAAAAAGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACaagcaaagca > 1:142839/1‑71 (MQ=255) tttAAAAAGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACaagca < 1:2909233/66‑1 (MQ=255) aaaaaGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACa < 1:3400910/55‑1 (MQ=255) aaaaaGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGt > 1:4812050/1‑71 (MQ=255) aaaaGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGt > 1:4004684/1‑70 (MQ=255) aaaaGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGt < 1:3234940/70‑1 (MQ=255) aaaGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCa > 1:2076615/1‑71 (MQ=255) aaaGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCa > 1:5745958/1‑71 (MQ=255) gTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATaa < 1:7802114/71‑1 (MQ=255) gTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATaa < 1:834386/71‑1 (MQ=255) aaggCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATg < 1:2040944/69‑1 (MQ=255) aCGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACaagcaaagc > 1:3587246/1‑59 (MQ=255) aCGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAAt < 1:4836907/70‑1 (MQ=255) aCGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATg < 1:5083780/71‑1 (MQ=255) aCGGCTGTCAATTTTTTGACGATAAATTACAAATAAGATCAAAAACAGACAAGCAAAGCATGTCATAAAt < 1:4036674/70‑1 (MQ=255) cTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACa > 1:1385579/1‑70 (MQ=255) tGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaa > 1:3898323/1‑70 (MQ=255) gTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAAt > 1:2368153/1‑64 (MQ=255) gTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaa > 1:2963404/1‑70 (MQ=255) tCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAAt < 1:6589797/63‑1 (MQ=255) aaTTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCAt < 1:1861997/57‑1 (MQ=255) aaTTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGa > 1:7688587/1‑63 (MQ=255) aaTTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGt < 1:7789773/71‑1 (MQ=255) aaTTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGt > 1:1603808/1‑71 (MQ=255) aTTTTTTGACGATAAATTACAAATACGATCAAAAACAGACaag > 1:3937267/1‑43 (MQ=255) aTTTTTTGACGATAAATTACAAATACGATCAAAAACAGACaag > 1:5055098/1‑43 (MQ=255) aTTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTg < 1:5751469/71‑1 (MQ=255) ttttttGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATa < 1:5183224/56‑1 (MQ=255) ttttttGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGa > 1:3948528/1‑71 (MQ=255) ttttttGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGa > 1:4890863/1‑71 (MQ=255) tttttgatcgtatttgtaatttatcgtcaaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGa > 1:2120956‑M2/34‑70 (MQ=255) TTTTTGACGATAAATTACAAATACGATCAAAAACAGACaagcaaagc > 1:2026933‑M1/1‑47 (MQ=255) TTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATaaa < 1:1102401‑M1/56‑1 (MQ=255) TTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATaa < 1:1393293‑M1/55‑1 (MQ=255) tttgatcgtatttgtaatttatcgtcaaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACa > 1:7382945‑M2/32‑70 (MQ=255) TTTGACGATAAATTACAAATACGATCAAAAACAGACaagcaaagca < 1:3454073‑M1/46‑1 (MQ=255) TTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATa < 1:2525708‑M1/53‑1 (MQ=255) TTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATa < 1:5123154‑M1/53‑1 (MQ=255) TTTGACGATAAATTACAAATACGATCAAAA‑CAGACAAGCAAAGCATGTCATAAATGACAAAAGGTGACAt > 1:7581263‑M1/1‑70 (MQ=255) ttgatcgtatttgtaatttatcgtcaaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACAt > 1:1208463‑M2/31‑70 (MQ=255) TGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCAt > 1:2142584‑M1/1‑45 (MQ=255) TGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATaa < 1:1070549‑M1/71‑1 (MQ=255) gatcgtatttgtaatttatcgtcaaaaaCAGACaagcaaagca < 1:765205‑M2/15‑1 (MQ=255) gatcgtatttgtaatttatcgtcaaaaaCAGACaagcaaagca < 1:7299464‑M2/15‑1 (MQ=255) gATAAATTACAAATACGATCAAAAACAGACaagcaaagca < 1:556375/40‑1 (MQ=255) aTAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAg < 1:3399455/58‑1 (MQ=255) aTAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAg < 1:6339896/58‑1 (MQ=255) aTAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTg < 1:2187484/69‑1 (MQ=255) aTAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTa < 1:1040437/71‑1 (MQ=255) aTAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTa < 1:3145978/71‑1 (MQ=255) tAAATTACAAATACGATCAAAAACAGACaagcaaag < 1:5776557/36‑1 (MQ=255) tAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATg > 1:2303253/1‑40 (MQ=255) tAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaa < 1:2893888/54‑1 (MQ=255) tAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATa < 1:4280352/64‑1 (MQ=255) tAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATa < 1:4205947/64‑1 (MQ=255) tAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATa < 1:5483264/64‑1 (MQ=255) tAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTAt > 1:759676/1‑71 (MQ=255) tAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTAt > 1:3497325/1‑71 (MQ=255) aaTTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTAtt < 1:7343972/70‑1 (MQ=255) aaTTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTAtt > 1:2511254/1‑70 (MQ=255) aaTTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTc < 1:170822/71‑1 (MQ=255) aaTTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTc < 1:6842556/71‑1 (MQ=255) tACAAATACGATCAAAAACAGACAAGCAAAGCATGt < 1:5683445/36‑1 (MQ=255) tACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGa > 1:5803135/1‑55 (MQ=255) tACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGa > 1:5996694/1‑55 (MQ=255) aCAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaaaa > 1:3654661/1‑50 (MQ=255) aCAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaaaa > 1:1726612/1‑50 (MQ=255) aCAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaaaa > 1:5407991/1‑50 (MQ=255) aCAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAg > 1:2568402/1‑69 (MQ=255) aCAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAg > 1:4645459/1‑69 (MQ=255) aaaTACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTc < 1:1339706/65‑1 (MQ=255) aaaTACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTc < 1:3337392/65‑1 (MQ=255) aaaTACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGgaga < 1:7675963/71‑1 (MQ=255) aaTACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGa > 1:2458284/1‑41 (MQ=255) aaTACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGa > 1:5539367/1‑41 (MQ=255) aaTACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGa > 1:6708697/1‑41 (MQ=255) cGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTc < 1:587845/60‑1 (MQ=255) cGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGtt < 1:4711965/71‑1 (MQ=255) cGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGtt < 1:6021274/71‑1 (MQ=255) taTCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaaa > 1:7839035/2‑41 (MQ=255) gATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaaa > 1:3765709/1‑41 (MQ=255) gATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaaa > 1:7832652/1‑41 (MQ=255) gATCAAAAACAGACAAGCAAAGCATGTCATAAATGACaaaa > 1:1249575/1‑41 (MQ=255) aTCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTAt < 1:1667122/71‑1 (MQ=255) aTCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTAt < 1:5751550/71‑1 (MQ=255) caaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATgg > 1:4254207‑M2/7‑71 (MQ=255) aaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATgg < 1:1342896‑M2/65‑1 (MQ=255) aaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATgg > 1:6493475‑M2/6‑70 (MQ=255) aaaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATgg > 1:2072408‑M2/6‑70 (MQ=255) aaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATaa > 1:6387729‑M2/5‑46 (MQ=255) aaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGagag < 1:4203080‑M2/57‑1 (MQ=255) aaaaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGagag < 1:405933‑M2/57‑1 (MQ=255) aaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGgcag > 1:7497740‑M2/3‑70 (MQ=255) aaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGgcag > 1:2592380‑M2/3‑70 (MQ=255) aaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGgcag > 1:4955494‑M2/3‑70 (MQ=255) aaCAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGgcag > 1:2777364‑M2/3‑70 (MQ=255) cAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACt < 1:6505588/44‑1 (MQ=255) | TTCACCAATTGTTTAAAAAGTGACGGCTGTCAATTTTTTGACGATAAATTACAAATACGATCAAAAACAGACAAGCAAAGCATGTCATAAATGACAAAAAGTGACATAACTGTATTCAGGAGAGGGTTATGGCAG > W3110S.gb/3562982‑3563116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |