| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3677973 | 117 (1.440) | 7 (0.100) | 3/88 | NT | 5.8% | coding (739/1476 nt) | ilvC | ketol‑acid reductoisomerase, NAD(P)‑binding |
| ? | W3110S.gb | = 3677990 | 123 (1.680) | coding (722/1476 nt) | ilvC | ketol‑acid reductoisomerase, NAD(P)‑binding | |||||
Only 100 of 155 total aligned reads displayed.
CTTCGGTGATGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGCCCATC > W3110S.gb/3677922‑3678058 | cTTCGGTGATGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTccccc < 1:3402226/71‑1 (MQ=255) cGGTGATGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCAccagc < 1:3532987‑M2/71‑6 (MQ=255) cGGTGATGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCAccagc < 1:6638530‑M2/71‑6 (MQ=255) gTGATGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCtt < 1:4554689/71‑1 (MQ=255) gATGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCCCCAGCTTGt > 1:1724448/1‑71 (MQ=255) aTGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTc > 1:1938910/1‑71 (MQ=255) tGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCg < 1:6565174/71‑1 (MQ=255) tGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCg < 1:4793635/71‑1 (MQ=255) tGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCg < 1:7664224/71‑1 (MQ=255) tGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCg < 1:3618815/71‑1 (MQ=255) tGGTTTCCCAACCGAACTGAATCAGTTTTTCTCCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCg < 1:2956040/71‑1 (MQ=255) gTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCg > 1:5635379/1‑69 (MQ=255) gTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGa < 1:7151556/70‑1 (MQ=255) gTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGa < 1:2715656/70‑1 (MQ=255) tttCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAg > 1:1136146/1‑71 (MQ=255) ccAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGcaca < 1:633813/71‑1 (MQ=255) ccAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGcaca < 1:1956160/71‑1 (MQ=255) cAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCAcca > 1:3425963‑M2/1‑52 (MQ=255) cAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCAcag < 1:1692028/71‑1 (MQ=255) cAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCAcag < 1:2337078/71‑1 (MQ=255) aCCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCAcagca < 1:6849911/71‑1 (MQ=255) ccGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGca > 1:1669917/1‑65 (MQ=255) ccGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCAcag > 1:5376208/1‑68 (MQ=255) cGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGTTACCTTCTTCCACCAGCTTGTCGAAGCAcagca > 1:7008161/1‑69 (MQ=255) cGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCaga < 1:7922138/71‑1 (MQ=255) gAACTGAATCAGTTTTTCTGCGTATGCTCGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCagag < 1:5682227/71‑1 (MQ=255) aaCTGAATGAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTGGAAGCACAGCaga > 1:722952/1‑69 (MQ=255) aaCTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCaga > 1:119715/1‑69 (MQ=255) aCTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCagagag < 1:3140259/71‑1 (MQ=255) cTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGtgc < 1:4576699/71‑1 (MQ=255) cTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGagc > 1:5629008/1‑71 (MQ=255) tGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGa < 1:7280950/55‑1 (MQ=255) gAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCagag > 1:2756380/1‑66 (MQ=255) gAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCagag > 1:4940816/1‑66 (MQ=255) aaTCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAg > 1:1929989/1‑55 (MQ=255) aaTCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGagccag > 1:1914491/1‑71 (MQ=255) aaTCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGagcca < 1:2093339/70‑1 (MQ=255) tCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGagccagcc > 1:2365906/1‑71 (MQ=255) tCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGagccagcc > 1:3473423/1‑71 (MQ=255) cAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGagcca > 1:4439157/1‑67 (MQ=255) aGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCAcagca > 1:6307365/1‑58 (MQ=255) aGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCAcagca > 1:3215325/1‑58 (MQ=255) tttttCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCg < 1:1155942/46‑1 (MQ=255) agttttTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGt > 1:1281308/3‑44 (MQ=38) ttttCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCaa > 1:3966298/1‑71 (MQ=255) tttCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGagccagc > 1:6617939/1‑64 (MQ=255) tttCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCaa > 1:3042238/1‑70 (MQ=255) tttCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCaa < 1:7027318/70‑1 (MQ=255) gCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTc > 1:7913034/1‑38 (MQ=255) gCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATAcc > 1:1785289/1‑71 (MQ=255) tATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGca > 1:7570208/1‑41 (MQ=255) tATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGca > 1:178740/1‑41 (MQ=255) tATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGca > 1:7213573/1‑41 (MQ=255) tGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGca > 1:3661321/1‑69 (MQ=255) tGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGca > 1:5459386/1‑69 (MQ=255) tGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGca > 1:5705417/1‑69 (MQ=255) tGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGca > 1:5957767/1‑69 (MQ=255) tGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGca > 1:2832539/1‑69 (MQ=255) gCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAg > 1:5651852/1‑71 (MQ=255) cTGGATCGGTACCTTCTTCCAccagcatacgcagaaaaactgattcagttcgg > 1:3011655‑M2/1‑21 (MQ=255) cTGGATCGGTACCTTCTTCCAccagcatacgcagaaaaactgattcagttcgg > 1:4160745‑M2/1‑21 (MQ=255) cTGGATCGGTACCTTCTTCCAccagcatacgcagaaaaactgattcagttcgg > 1:5474509‑M2/1‑21 (MQ=255) cTGGATCGGTACCTTCTTCCACCAGCTTGTAGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAg < 1:859605/70‑1 (MQ=255) tGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGa > 1:6469404/1‑71 (MQ=255) ggATCGGTACCTTCTTCCAccagcatacgcagaaaaactgattcagttcggtt < 1:111521‑M2/53‑35 (MQ=255) ggATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGc < 1:2279583/54‑1 (MQ=255) gATCGGTACCTTCTTCCAccagcatacgcagaaaaactgattcagttaggttggga < 1:5243013‑M2/56‑39 (MQ=255) aTCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATgg < 1:307963/71‑1 (MQ=255) tCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGt < 1:6428758/71‑1 (MQ=255) ggTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGttt > 1:7814206/1‑71 (MQ=255) ggTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGtt < 1:1177493/70‑1 (MQ=255) ggTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGtt < 1:4102988/70‑1 (MQ=255) gTACCTTCTTCCACCAGCTTGTCGAATCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGt < 1:2228468/68‑1 (MQ=255) gTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTg < 1:6485323/71‑1 (MQ=255) gTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTg > 1:1245120/1‑71 (MQ=255) tACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGc < 1:1128030/71‑1 (MQ=255) tACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGc < 1:601053/71‑1 (MQ=255) aCCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCt > 1:4613942/1‑71 (MQ=255) aCCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCt > 1:6897265/1‑71 (MQ=255) ccTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGagcca > 1:772885/1‑39 (MQ=255) ccTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTg > 1:260359/1‑44 (MQ=255) ccTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTg < 1:4033970/68‑1 (MQ=255) ccTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTg < 1:6264785/68‑1 (MQ=255) ccTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCt < 1:4953247/70‑1 (MQ=255) ccTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTc < 1:3500691/71‑1 (MQ=255) ccTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTc > 1:2290903/1‑71 (MQ=255) ccTTCTTCCACCAGCTTGTCGAAGCACACCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTg < 1:3098284/68‑1 (MQ=255) cttcttCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGc < 1:4765680/44‑1 (MQ=255) cttcttCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGc < 1:1328292/44‑1 (MQ=255) ttcttcCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACa < 1:1031027/47‑1 (MQ=255) tcttcCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGcc > 1:7185980/1‑71 (MQ=255) tcttcCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGcc > 1:7517330/1‑71 (MQ=255) tcttcCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGcc > 1:4346436/1‑71 (MQ=255) tcttcAACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGtt > 1:5733889/1‑63 (MQ=255) cttcCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATa > 1:7835328/1‑47 (MQ=255) ttcCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGCCCa > 1:3369164/1‑71 (MQ=255) ccaccaGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGCCCAt > 1:6179445/1‑70 (MQ=255) caccaGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGCCCAt > 1:5186323/1‑69 (MQ=255) caccaGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGCCCATc < 1:3573833/70‑1 (MQ=255) accaGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATg < 1:2445384/54‑1 (MQ=255) | CTTCGGTGATGGTTTCCCAACCGAACTGAATCAGTTTTTCTGCGTATGCTGGATCGGTACCTTCTTCCACCAGCTTGTCGAAGCACAGCAGAGAGCCAGCCTGCAACATACCGCACAGGATGGTTTGCTCGCCCATC > W3110S.gb/3677922‑3678058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |