| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1931279 | 44 (0.950) | 3 (0.070) | 3/92 | NT | 7.2% | coding (143/660 nt) | yebE | conserved hypothetical protein |
| ? | W3110S.gb | = 1931292 | 38 (0.910) | coding (130/660 nt) | yebE | conserved hypothetical protein | |||||
GCTCCGCCGCCAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATCCCTGATCCG > W3110S.gb/1931222‑1931354 | gCTCCGCCGCCAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGAc < 1:648318/71‑1 (MQ=255) cTCCGCCGCCAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGAc > 1:2522460/1‑70 (MQ=255) tCCGCCGCCAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGAc > 1:48669/1‑69 (MQ=255) cgccgcCAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACcag > 1:3571146‑M2/1‑67 (MQ=255) gccgccAACCTGTAACGCTTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACcagca > 1:1455406‑M2/1‑66 (MQ=255) gccgccAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACcag < 1:3493826‑M2/69‑4 (MQ=255) gccAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGcagcc > 1:2922074/1‑71 (MQ=255) ccAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGcagccc < 1:1029824/71‑1 (MQ=255) aaCCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGcagcccag < 1:375847/71‑1 (MQ=255) aaCCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGcagccca > 1:3069147/1‑70 (MQ=255) aCCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGcagcccagc < 1:506055/71‑1 (MQ=255) ccAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGcagcccagc > 1:1373230/1‑70 (MQ=255) cAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCccagcca < 1:379277/71‑1 (MQ=255) gTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACcagca > 1:2151262‑M2/1‑55 (MQ=255) aCGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTcc < 1:801298/70‑1 (MQ=255) gcgTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGcc > 1:1304044/1‑71 (MQ=255) gcgTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGc > 1:102064/1‑70 (MQ=255) gTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCt < 1:2900442/70‑1 (MQ=255) ttGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTaa < 1:3008259/71‑1 (MQ=255) ccATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGcc > 1:3802534/1‑71 (MQ=255) cATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCt < 1:2213636/71‑1 (MQ=255) tatTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACcag > 1:3356914‑M2/1‑38 (MQ=255) atTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTgg > 1:1786632/1‑70 (MQ=255) tttCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCccagcca < 1:4233799/50‑1 (MQ=255) tttCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGc < 1:1122190/70‑1 (MQ=255) tttCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCa > 1:2381265/1‑71 (MQ=255) cGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACt < 1:1622262/70‑1 (MQ=255) cGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACt > 1:1143173/1‑70 (MQ=255) tAAGAAGTTTACGTGCTGATTTATTTGCGACCAGcagcccagcc < 1:280522/44‑1 (MQ=255) agaagTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAg < 1:143483/71‑1 (MQ=255) gTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCt < 1:2046206/56‑1 (MQ=255) gTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTg < 1:431037/71‑1 (MQ=255) gTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTg < 1:3626505/71‑1 (MQ=255) ttACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGAc > 1:848164/1‑71 (MQ=255) ttACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGAc > 1:586462/1‑71 (MQ=255) tACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCt > 1:462305/1‑44 (MQ=255) tACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGAc < 1:799979/70‑1 (MQ=255) tACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGAc > 1:681636/1‑70 (MQ=255) aCGTGCTGATTTATTTGCGACcagcacgtaaacttcttacgagatatggcaccaacgcgttactggttggc < 1:3440122‑M2/71‑51 (MQ=255) aCGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGAcc > 1:1441445/1‑70 (MQ=255) cGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTaa > 1:3282002/1‑44 (MQ=255) cGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTaa > 1:4171644/1‑44 (MQ=255) cGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCa < 1:3023951/70‑1 (MQ=255) gTGCTGATTTATTTGCGACcagcacgtaaacttcttacgaaatatggcaccaacgcgttactgg < 1:2813186‑M2/64‑46 (MQ=255) gTGCTGATTTATTTGCGACcagcacgtaaacttcttacgaaatatggcaccaacgcgttactgg > 1:1686615‑M2/1‑19 (MQ=255) cTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATccc < 1:3398804/71‑1 (MQ=255) cTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATccc > 1:715877/1‑71 (MQ=255) atttatttGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATCCCTg < 1:2410409/70‑1 (MQ=255) ttatttGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATCCCTGATc > 1:2277961/1‑71 (MQ=255) tttGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATCCCTGATCCg < 1:3618183/70‑1 (MQ=255) tttGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATCCCTGATCCg < 1:1031743/70‑1 (MQ=255) ttGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATCCCTGATCCg > 1:454651/1‑69 (MQ=255) gACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATCACTGATc > 1:4256560/1‑63 (MQ=255) aCCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGtt > 1:4196764/1‑46 (MQ=255) | GCTCCGCCGCCAACCAGTAACGCGTTGGTGCCATATTTCGTAAGAAGTTTACGTGCTGATTTATTTGCGACCAGCAGCCCAGCCAGTCCGCCTAATGCGCCTGGCACTAACAGTTTGACCAATCCCTGATCCG > W3110S.gb/1931222‑1931354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |