| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 3028230 = | 64 (1.380) | 3 (0.070) | 3/94 | NT | 5.3% | coding (1358/1920 nt) | ygfT | fused predicted oxidoreductase Fe‑S subunit and nucleotide‑binding subunit |
| ? | W3110S.gb | 3028255 = | 49 (1.150) | coding (1333/1920 nt) | ygfT | fused predicted oxidoreductase Fe‑S subunit and nucleotide‑binding subunit | |||||
CGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAAT > W3110S.gb/3028185‑3028324 | cGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCgg < 1:737537/71‑1 (MQ=255) gCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGa < 1:535227/71‑1 (MQ=255) aaCAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATAc > 1:2670754/1‑71 (MQ=255) aaCAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATAc > 1:717847/1‑71 (MQ=255) aTCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATActct < 1:1829441/70‑1 (MQ=255) aTCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATActct < 1:2036652/70‑1 (MQ=255) tCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTc < 1:2383744/71‑1 (MQ=255) tCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTc < 1:1840764/71‑1 (MQ=255) cATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCa < 1:2924481/70‑1 (MQ=255) aTTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATa > 1:403232/1‑62 (MQ=255) ttGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCgg < 1:3826517/58‑1 (MQ=255) ttGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGAc > 1:1263520/1‑71 (MQ=255) ttGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGAc > 1:192297/1‑71 (MQ=255) gTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCtt < 1:809099/64‑1 (MQ=255) gTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTc > 1:3157479/1‑71 (MQ=255) tCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTc < 1:781329/70‑1 (MQ=255) aTCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTc < 1:2940772/60‑1 (MQ=255) tCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCtt < 1:1474258/58‑1 (MQ=255) tCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCa < 1:2498783/70‑1 (MQ=255) ccGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCgg < 1:697769/67‑1 (MQ=255) gCCACCGCCCAATACCACGACTAGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATc > 1:2106970/1‑71 (MQ=255) cACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATccc < 1:1342718/71‑1 (MQ=255) cACCCCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCgg < 1:1917253/64‑1 (MQ=255) aCCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCa > 1:79400/1‑71 (MQ=255) ccGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCAt > 1:704411/1‑71 (MQ=255) cccccAAAACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCa < 1:4215369/61‑1 (MQ=255) aaTACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATccc > 1:4098400/1‑63 (MQ=255) aTACCACGACTCGCTTACCTTCCACGTCCGTCAGCTGATACTCTTCAGACTCCGGCAATCCCATg < 1:2953943/65‑1 (MQ=255) aTACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTgg < 1:57673/71‑1 (MQ=255) aTACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTg > 1:2733360/1‑70 (MQ=255) aTACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATAATCtt < 1:3843225/45‑1 (MQ=255) tACCACGACTCGCTTACCTTCCACGTCTGTCAGCGGATACTCtt < 1:2419843/44‑1 (MQ=255) aCCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCg > 1:278807/1‑71 (MQ=255) ccACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCgg < 1:2642951/52‑1 (MQ=255) cACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCa < 1:2313538/43‑1 (MQ=255) cACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATcc < 1:4127026/57‑1 (MQ=255) cGACTCGCTTACCTTCCACGTCCGTCAGCGTATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTa > 1:2696353/1‑71 (MQ=255) cGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATcc < 1:3244118/55‑1 (MQ=255) tCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCggg < 1:656333/65‑1 (MQ=255) cgctgacggacgtggaaggtaagcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATggg > 1:3433347‑M2/26‑70 (MQ=255) GCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATggg > 1:3818918‑M1/1‑69 (MQ=255) GCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATggg < 1:3938183‑M1/69‑1 (MQ=255) TTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGt < 1:3057394‑M1/71‑1 (MQ=255) TTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGt < 1:2679933‑M1/71‑1 (MQ=255) TTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGt < 1:2074927‑M1/71‑1 (MQ=255) acggacgtggaaggtaagcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGt > 1:2812104‑M2/21‑69 (MQ=255) ccTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCa < 1:2120248/70‑1 (MQ=255) cTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGt < 1:2014467/58‑1 (MQ=255) cTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAgg < 1:2874103/71‑1 (MQ=255) cTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAgg < 1:3265149/71‑1 (MQ=255) cTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAgg < 1:3838597/71‑1 (MQ=255) tCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATcc < 1:3897900/41‑1 (MQ=255) tCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGaa > 1:677532/1‑71 (MQ=255) ccACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTa > 1:1097226/1‑56 (MQ=255) cACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAAc < 1:4108496/70‑1 (MQ=255) aCGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACgg < 1:3832125/71‑1 (MQ=255) aCGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACgg < 1:4203785/71‑1 (MQ=255) gtccgtcAGCGGATACTCTTCAGACTCCGGCAATcc > 1:1904463/1‑36 (MQ=255) gtccgtcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCTGGTATGGGCAGTCAGGAACGGTa < 1:3012034/71‑1 (MQ=255) gtccgtcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTa < 1:3771361/71‑1 (MQ=255) gtccgtcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTa < 1:873552/71‑1 (MQ=255) gaaggtaagcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGt < 1:38793‑M2/59‑1 (MQ=255) tccgtcAGCGGATACTCTTCAGACTCCGTCAATCCCATGAGCTGGCGGGTATGGGCAGTCa < 1:1008065/61‑1 (MQ=255) ccgtcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTa > 1:2563231/1‑69 (MQ=255) cgtcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTagag < 1:471148/71‑1 (MQ=255) cgtcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTagag > 1:534094/1‑71 (MQ=255) cgtcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTagag > 1:2084733/1‑71 (MQ=255) tgagcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCggg < 1:3097687‑M2/39‑1 (MQ=255) tcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCggg < 1:219141/45‑1 (MQ=255) tcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTa > 1:2313430/1‑47 (MQ=255) tcAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTc < 1:568781/56‑1 (MQ=255) agcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTAt < 1:936238‑M2/42‑1 (MQ=255) agcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATggg < 1:557588‑M2/45‑1 (MQ=255) agcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTa > 1:2888609‑M2/5‑64 (MQ=255) agcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGc > 1:3315615‑M2/5‑68 (MQ=255) agcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTg < 1:3173123‑M2/67‑1 (MQ=255) agcgGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTg < 1:3178430‑M2/67‑1 (MQ=255) agcgGATACTCTTCAGACTCCGGCAATCCCAAGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCt > 1:633807‑M2/5‑70 (MQ=255) gGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAAt < 1:2371627‑M2/70‑1 (MQ=255) | CGCAAACAATCCATTGTCGTATCGCCACCGCCCAATACCACGACTCGCTTACCTTCCACGTCCGTCAGCGGATACTCTTCAGACTCCGGCAATCCCATGAGCTGGCGGGTATGGGCAGTCAGGAACGGTAGAGCCTGAAT > W3110S.gb/3028185‑3028324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |