| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3746912 | 0 (0.000) | 81 (1.900) | 51/94 | NT | 100% | coding (71/447 nt) | tnaB | tryptophan transporter of low affinity |
| ? | W3110S.gb | 3748112 = | 0 (0.000) | coding (871/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCA > W3110S.gb/3748043‑3748182 | acaggtccgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagag < 1:347267‑M2/2‑1 (MQ=255) cgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca < 1:2339265‑M2/9‑1 (MQ=255) cgccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca < 1:3922955‑M2/9‑1 (MQ=255) gccagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACca < 1:914021‑M2/9‑1 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACTCcagca < 1:551239‑M2/12‑1 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagca < 1:526340‑M2/12‑1 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagca < 1:1399337‑M2/12‑1 (MQ=255) cagataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcag > 1:1622481‑M2/60‑69 (MQ=255) agataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag > 1:896927‑M2/59‑71 (MQ=255) gataatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAgg > 1:3878947‑M2/58‑71 (MQ=255) taatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGc > 1:2044607‑M2/56‑70 (MQ=255) aatcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa > 1:2042834‑M2/55‑70 (MQ=255) atcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa < 1:2057829‑M2/17‑1 (MQ=255) atcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa < 1:1658159‑M2/17‑1 (MQ=255) atcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa < 1:614620‑M2/17‑1 (MQ=255) tcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa > 1:2716311‑M2/53‑71 (MQ=255) tcgaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaaaa > 1:2259311‑M2/53‑71 (MQ=255) gaacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagcag > 1:193527‑M2/51‑63 (MQ=255) aacaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc > 1:1679779‑M2/50‑71 (MQ=255) acaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTc > 1:2963782‑M2/49‑70 (MQ=255) acaaccccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:1950147‑M2/23‑1 (MQ=255) cccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa < 1:683649‑M2/17‑1 (MQ=255) cccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATaa < 1:4204030‑M2/27‑1 (MQ=255) cccagcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAAt > 1:1503574‑M2/44‑71 (MQ=255) cccagcgtgacaccaaagaacgaactggcaacagctaacttagAGAACACCAGCAGGCAAAACTCGATAAt < 1:2585348‑M2/28‑1 (MQ=255) agcgtgacaccaaagaacgaactggcaacagctaagttaga > 1:1654715‑M2/41‑41 (MQ=255) agcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc < 1:2924993‑M2/31‑1 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACcagc < 1:1435900‑M2/11‑1 (MQ=255) gcgtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCg > 1:3868054‑M2/40‑71 (MQ=255) gcgtgacaccaaacaacgaactggcaacagctaagttagAGAACACCAGCAGGc < 1:1323382‑M2/15‑1 (MQ=255) cgtgacaccaaagaacgaactggcaacagctaagttagAGAacac > 1:1620482‑M2/39‑45 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGaa > 1:3685353‑M2/38‑41 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGaa > 1:3062738‑M2/38‑41 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg < 1:3646679‑M2/34‑1 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg < 1:3620002‑M2/34‑1 (MQ=255) gtgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg < 1:2512748‑M2/34‑1 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa < 1:3772493‑M2/17‑1 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGa < 1:3936884‑M2/24‑1 (MQ=255) tgacaccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGc > 1:4268163‑M2/37‑71 (MQ=255) caccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt < 1:1648199‑M2/38‑1 (MQ=255) caccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt > 1:133078‑M2/34‑71 (MQ=255) accaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGtt < 1:3418973‑M2/39‑1 (MQ=255) ccaaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCa < 1:1997165‑M2/16‑1 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACcag > 1:1643873‑M2/31‑40 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGTTAATGCCGTGCTGTTTg < 1:2238901‑M2/41‑1 (MQ=255) caaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTg > 1:3231797‑M2/31‑71 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg > 1:3245521‑M2/30‑63 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg > 1:4058576‑M2/30‑63 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGtt < 1:3335846‑M2/39‑1 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTgg > 1:2112879‑M2/30‑71 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTgg > 1:1255224‑M2/30‑71 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTg > 1:2173088‑M2/30‑70 (MQ=255) aaagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCATGCTGtt > 1:2439182‑M2/30‑68 (MQ=255) aagaacgaactggcaacagctaagttagAGAACACCAGCAGGCaa < 1:1434595‑M2/17‑1 (MQ=255) aagaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt > 1:785862‑M2/29‑71 (MQ=255) agaacgaactggcaacagttaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt > 1:1839350‑M2/28‑70 (MQ=255) agaacgaactggcaacagctaagttagAGAACACcagca > 1:3298558‑M2/28‑39 (MQ=255) gaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCg > 1:3248442‑M2/27‑58 (MQ=255) gaacgaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGc > 1:1848332‑M2/27‑71 (MQ=255) gaactggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAg > 1:1401‑M2/23‑71 (MQ=255) ctggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATa > 1:1371887‑M2/20‑45 (MQ=255) tggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTg < 1:2136306‑M2/37‑1 (MQ=255) tggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGttt < 1:757616‑M2/40‑1 (MQ=255) ggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATa < 1:3481180‑M2/26‑1 (MQ=255) ggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGc > 1:3186120‑M2/18‑52 (MQ=255) ggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGc > 1:1376251‑M2/18‑52 (MQ=255) ggcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt < 1:4214466‑M2/43‑1 (MQ=255) gcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt < 1:1161473‑M2/38‑1 (MQ=255) gcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt < 1:1985595‑M2/38‑1 (MQ=255) gcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAAc < 1:3282244‑M2/53‑1 (MQ=255) gcaacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAAc < 1:1490378‑M2/53‑1 (MQ=255) caacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACg < 1:927830‑M2/54‑1 (MQ=255) caacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAt > 1:2364335‑M2/16‑71 (MQ=255) caacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAt < 1:657220‑M2/56‑1 (MQ=255) aacagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAtt > 1:929308‑M2/15‑71 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:2667625‑M2/23‑1 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCg < 1:61985‑M2/23‑1 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc < 1:1006713‑M2/31‑1 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGcc < 1:3110595‑M2/31‑1 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt > 1:3735474‑M2/14‑51 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGt > 1:3628220‑M2/14‑51 (MQ=255) acagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAttt < 1:2573185‑M2/58‑1 (MQ=255) cagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGcc < 1:4183098‑M2/46‑1 (MQ=255) cagctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTc < 1:360748‑M2/59‑1 (MQ=255) agctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTg > 1:961159‑M2/12‑45 (MQ=255) ctaagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAc > 1:765335‑M2/10‑70 (MQ=255) aagttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGc > 1:1876676‑M2/8‑52 (MQ=255) agttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGc < 1:1018715‑M2/65‑1 (MQ=255) cttAGAGAACACCAGCAGGCAAAACTCGATAATGCCTTGCTGt < 1:724198/43‑1 (MQ=255) ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGa < 1:1802824‑M2/67‑1 (MQ=255) tagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGaa > 1:2728780‑M2/4‑71 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGt > 1:3848198‑M2/3‑45 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCTAGGAACGa < 1:336166‑M2/55‑1 (MQ=255) agAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAt > 1:2672313‑M2/3‑71 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCa < 1:1666555/63‑1 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCa < 1:363315/71‑1 (MQ=255) agaACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCa < 1:180327/71‑1 (MQ=255) | CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATCA > W3110S.gb/3748043‑3748182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |