| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | 381129 = | NA (NA) | 5 (0.110) | 5/90 | NT | NA | coding (232/906 nt) | insD | IS2 insertion element transposase InsAB' |
| ? | W3110S.gb | 381154 = | NA (NA) | coding (257/906 nt) | insD | IS2 insertion element transposase InsAB' | |||||
Only 100 of 191 total aligned reads displayed.
GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/381204‑381129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTG > W3110S.gb/381154‑381222 GCAACAGCGCATTCTGGCGCATGATCCGTTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:3305320/71‑1GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT > 1:2404371/1‑71GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:2582934/71‑1GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:1894401/71‑1GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT > 1:1873353/1‑71GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:3211204/71‑1GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:3431634/71‑1GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT > 1:3521073/1‑71GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT > 1:3686157/1‑71GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:4157632/71‑1GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:4469175/71‑1GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:4580521/71‑1GCAACAGCGCATTCTGGCGCATGATCCGGTAAACAAGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:1804101/71‑1 CAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTG > 1:2687480/1‑71 AACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGC < 1:457298/71‑1 AACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGC < 1:2238021/71‑1 AACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTG < 1:250426/70‑1 ACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCC > 1:1131440/1‑71 CAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT > 1:3456904/1‑71 CAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT > 1:1251981/1‑71 CAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT > 1:1557370/1‑71 CAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT > 1:1092744/1‑71 CAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT < 1:2165948/71‑1 CAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT > 1:2594925/1‑71 CAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT > 1:2426959/1‑71 CAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTG > 1:827633/1‑68 AGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG > 1:3094673/1‑71 AGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG < 1:2968242/71‑1 AGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG < 1:760384/71‑1 AGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG > 1:735550/1‑71 AGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG > 1:1757786/1‑71 AGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT < 1:1293554/70‑1 GCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTG < 1:1222519/66‑1 CGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCC > 1:3350159/1‑67 CATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCC < 1:3636685/65‑1 TTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG > 1:2905501/1‑65 TTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG > 1:3603984/1‑65 TCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTG > 1:194529/1‑60 TCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTG > 1:1686015/1‑60 TGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTG < 1:4269239/51‑1 TCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCT < 1:3576920/51‑1 CACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGC > 1:3675179/1‑40 CACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTG < 1:535724/39‑1 CACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCT < 1:1623615/38‑1 CGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG < 1:84411/41‑1 CGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCC > 1:3807637/1‑39 GTTTGGCATTGATCGCAGGCATACCATCAAGTTCT > 1:2875271/1‑35 GCAGGCATACCATCAAGTTCTGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGC < 1:3821028/71‑1 CAGGCATACCATCAAGTTCTGCCTGTGATCAATGCCAAACGTGTTTA > 1:682040/1‑47 ATACCATCAAGTTCTGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAA < 1:228136/60‑1 TACCATCAAGTTCTGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCT < 1:3028809/71‑1 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCT < 1:3777767/71‑1 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCT > 1:802242/1‑71 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCT < 1:4243236/71‑1 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCT < 1:569588/71‑1 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACC < 1:4177532/70‑1 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAAC > 1:4547556/1‑69 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTG > 1:1484152/1‑60 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTT < 1:1183179/59‑1 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTT > 1:2032499/1‑55 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTG < 1:2398454/53‑1 TGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAAT < 1:295720/47‑1 GCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTG > 1:3500117/1‑71 GCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGC > 1:4595279/1‑50 GCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCG > 1:2618358/1‑49 GCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGA < 1:4050933/44‑1 CCTGCTATCAATGCCAAACGTGTTTACCGTATCATGCGCCAGAATGC < 1:1958004/47‑1 CCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCTCTGTTGCTTGAGCGAAAACCTG < 1:2368759/70‑1 CCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAATACCTGC < 1:596915/71‑1 CCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGC < 1:4587133/71‑1 CCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTG < 1:1641258/70‑1 CCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAA > 1:2494364/1‑66 CCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGA > 1:1710140/1‑59 CCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTG < 1:3215676/54‑1 CCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTT > 1:4374078/1‑53 CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCT > 1:2112074/1‑71 CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCT < 1:779386/71‑1 CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCT > 1:2887587/1‑71 CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCT > 1:2753155/1‑71 CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCT > 1:562601/1‑71 CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAA < 1:954858/63‑1 CTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTT < 1:3482157/56‑1 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTG > 1:940304/1‑71 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAAC > 1:4173698/1‑65 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAA < 1:2293464/63‑1 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAA < 1:1141213/63‑1 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAA < 1:4520917/63‑1 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTG < 1:1785813/56‑1 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGC < 1:1641558/53‑1 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTT > 1:1658167/1‑51 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAG < 1:1923610/40‑1 TGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAG < 1:3099024/40‑1 GCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTG > 1:1389812/1‑70 GCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTG > 1:4226645/1‑70 GCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTG > 1:3307550/1‑70 GCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTG > 1:4084660/1‑70 GCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTT > 1:3268673/1‑54 GCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGC > 1:1887843/1‑46 GCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGC > 1:2449491/1‑46 GCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGA > 1:2558704/1‑40 GCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < W3110S.gb/381204‑381129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctgCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTG > W3110S.gb/381154‑381222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |