| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 251730 | 36 (0.720) | 3 (0.070) | 3/92 | NT | 8.3% | coding (833/1056 nt) | dinB | DNA polymerase IV |
| ? | W3110S.gb | = 251736 | 34 (0.750) | coding (839/1056 nt) | dinB | DNA polymerase IV | |||||
CTGGTCTGAATGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGA > W3110S.gb/251662‑251799 | cTGGTCTGAATGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTaaaa > 1:3140058/1‑70 (MQ=255) cTGAATGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAt < 1:1294618‑M2/71‑2 (MQ=255) cTGAATGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAt < 1:3508757‑M2/71‑2 (MQ=255) aaTGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAttta < 1:4613378‑M2/71‑5 (MQ=255) aTGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAttta > 1:3671148‑M2/1‑66 (MQ=255) tgtgAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAtt < 1:1406351‑M2/67‑3 (MQ=255) gtgAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACt > 1:2428869/1‑70 (MQ=255) tgAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTg < 1:4027558/70‑1 (MQ=255) gCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTaaaa > 1:864892/1‑54 (MQ=255) gCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGc < 1:1490941/71‑1 (MQ=255) cGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAtt > 1:1755102‑M2/1‑58 (MQ=255) gATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTc > 1:2435504/1‑71 (MQ=255) aTTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAtt > 1:321408‑M2/1‑56 (MQ=255) aTCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGa > 1:4022786/1‑53 (MQ=255) aTCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGcc < 1:1826776/70‑1 (MQ=255) tCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑g < 1:1121683/71‑1 (MQ=255) aGCGGCTGTATCCGGAACTTGAACGCCGTCCGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑gggg > 1:136328/1‑71 (MQ=255) gCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑ggggg > 1:3992441/1‑71 (MQ=255) gCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑gggg > 1:2706263/1‑70 (MQ=255) ggCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAtcaggtttta < 1:2677846‑M1/50‑11 (MQ=255) cTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAtcaggttttacc > 1:1482570‑M1/1‑38 (MQ=255) tGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGaaa > 1:776077/1‑71 (MQ=255) gTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAtt > 1:2261480‑M2/1‑42 (MQ=255) tCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTa < 1:3001863/70‑1 (MQ=255) ccGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCAGGGGGGTGAAATTa > 1:2324855/1‑70 (MQ=255) ccGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTa > 1:2197683/1‑69 (MQ=255) cGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGAt < 1:4036579‑M2/38‑2 (MQ=255) cGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTa > 1:3288283/1‑68 (MQ=255) ggAACTTGAACGCCGTCTGGCAAAGGTAAAtcaggttttacc > 1:296675‑M1/1‑30 (MQ=255) aaCTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑g < 1:2083551/53‑1 (MQ=255) aaCTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTc < 1:2305599/71‑1 (MQ=255) aaCTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTc < 1:2101372/71‑1 (MQ=255) cTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGa < 1:134040/40‑1 (MQ=255) tGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGcc > 1:1309609/1‑47 (MQ=255) gAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTcgacga > 1:880334/1‑71 (MQ=255) aCGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGAtt < 1:466530/71‑1 (MQ=255) cGCCGTCTGGCAAAGGTAAAACCTGATTTACTGAt < 1:3216007/35‑1 (MQ=255) cGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCa > 1:1682069/1‑44 (MQ=255) cGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑‑GGGGTGAAATTAAAGTTcg < 1:962955/63‑1 (MQ=255) gCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGAtttt < 1:1133853/71‑1 (MQ=255) cGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGaaa > 1:3009718/1‑51 (MQ=255) cGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGaa > 1:3312518/1‑50 (MQ=255) cGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTc < 1:1358548/60‑1 (MQ=255) cGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCa < 1:4040604/71‑1 (MQ=255) gTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAg > 1:29034/1‑71 (MQ=255) tCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAg > 1:416536/1‑70 (MQ=255) aaaGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAacca > 1:975112/1‑71 (MQ=255) aaaGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAacca < 1:955308/71‑1 (MQ=255) aaaGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAacca > 1:2555579/1‑71 (MQ=255) ggTAAAACCTGAtttacctttgccagacggcgttcaagttccggatacag > 1:1482570‑M2/1‑12 (MQ=255) ggTAAAACCTGAtttacctttgccagacggcgttcaagttcc > 1:296675‑M2/1‑12 (MQ=255) ggTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCAccc < 1:521577/71‑1 (MQ=255) gTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCa < 1:4306123/71‑1 (MQ=255) tAAAtcaggttttacctttgccagacggcgttcaagttccggatacagccgctcgataatcgcttcacatt < 1:4613378‑M1/71‑68 (MQ=255) tAAAtcaggttttacctttgccagacggcgttcaagttccggatacagccgctcgataatcgcttcacat > 1:3671148‑M1/1‑4 (MQ=255) tAAAACCTGAtttacctttgccagacggcgttcaagttccggatacagcc < 1:2677846‑M2/50‑41 (MQ=255) tAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACTCAg > 1:4202467/1‑71 (MQ=255) aatcaggttttacctttgccagacggcgttcaagttccggatacagccgctcgataatcgcttcaca < 1:1406351‑M1/67‑66 (MQ=255) aatcaggttttacctttgccagacggcgttcaagttccggatacagccgctcgataatcg > 1:1755102‑M1/1‑2 (MQ=255) aatcaggttttacctttgccagacggcgttcaagttccggatacagccgctcgataat > 1:321408‑M1/1‑2 (MQ=255) aatcaggttttacctttgccagacggcgttcaagttccggatac > 1:2261480‑M1/1‑2 (MQ=255) aaaCCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAg > 1:2561852/1‑69 (MQ=255) atcaggttttacctttgccagacggcgttcaagttccggatacagccgctcgataatcgcttcacattcag < 1:3508757‑M1/71‑71 (MQ=255) atcaggttttacctttgccagacggcgttcaagttccggatacagccgctcgataatcgcttcacattcag < 1:1294618‑M1/71‑71 (MQ=255) atcaggttttacctttgccagacggcgttcaagttccg < 1:4036579‑M1/38‑38 (MQ=255) | CTGGTCTGAATGTGAAGCGATTATCGAGCGGCTGTATCCGGAACTTGAACGCCGTCTGGCAAAGGTAAAACCTGATTTACTGATTGCTCGCCA‑GGGGGTGAAATTAAAGTTCGACGATTTTCAGCAAACCACCCAGGA > W3110S.gb/251662‑251799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |