| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4492054 | 60 (1.200) | 3 (0.070) | 3/92 | NT | 5.1% | coding (55/1083 nt) | yjgQ | conserved inner membrane protein |
| ? | W3110S.gb | = 4492075 | 57 (1.260) | coding (76/1083 nt) | yjgQ | conserved inner membrane protein | |||||
TAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGC > W3110S.gb/4491985‑4492124 | tAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcat < 1:18928/71‑1 (MQ=255) aaaGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcat > 1:1814720/1‑70 (MQ=255) aGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcatcat > 1:982584/1‑71 (MQ=255) gAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatga > 1:494834/1‑71 (MQ=255) aGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatgat < 1:1484240/71‑1 (MQ=255) ggTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatgat > 1:4314596/1‑68 (MQ=255) tgtgATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGacac > 1:21255/1‑71 (MQ=255) tgATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTg > 1:4551084/1‑71 (MQ=255) tgATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTg > 1:972647/1‑71 (MQ=255) aTGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCatgat < 1:3358100/62‑1 (MQ=255) aTGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGtt < 1:1178182/71‑1 (MQ=255) gCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCa > 1:2442958/1‑71 (MQ=255) cAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCa < 1:2960815/70‑1 (MQ=255) aaCCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCAtcatgaacagtgtcatcatg < 1:2402297‑M1/71‑21 (MQ=255) aaCCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATg < 1:4412622/71‑1 (MQ=255) ccTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGaca > 1:4531307/1‑60 (MQ=255) ccTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCt > 1:2793816‑M2/1‑70 (MQ=255) ccTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCt < 1:3494903‑M2/71‑2 (MQ=255) ccTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCt > 1:1390400‑M2/1‑70 (MQ=255) cTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGt < 1:4022832/63‑1 (MQ=255) ttttGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGt < 1:1921196/62‑1 (MQ=255) ttGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCtgg > 1:4084656‑M2/1‑66 (MQ=255) ttGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCA > 1:513220‑M1/1‑45 (MQ=255) ggCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACcatcat < 1:3224094/47‑1 (MQ=255) gCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCAgcatgaacagtgtcatcatgatggtggt < 1:879705‑M1/70‑29 (MQ=255) cGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCAtgatga > 1:3098517/1‑50 (MQ=255) cGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCAAGCTGGTGTCGc > 1:3183410/1‑71 (MQ=255) tACTTGACCGCTATATCGGTAAAACTATTTTCCCCACCATCATGATGACACTGTTCATGCTGGTGTCGCt < 1:2033853/70‑1 (MQ=255) aCTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGtt < 1:4008359/54‑1 (MQ=255) aCTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCt < 1:2547546/69‑1 (MQ=255) cTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTc > 1:2943475/1‑71 (MQ=255) cTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTc > 1:3321128/1‑71 (MQ=255) ttGACCGCTATATCGGTAAAACTATTTTCACCACCATCatga > 1:3333008/1‑42 (MQ=255) tGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCgg > 1:3693312/1‑71 (MQ=255) gACCGCTATATCGGTAAACCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCg > 1:4488660/1‑63 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCgg < 1:4089284/70‑1 (MQ=255) gACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCg < 1:4096342/69‑1 (MQ=255) aCCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCggg > 1:3880050/1‑70 (MQ=255) aCCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGc < 1:3190257/71‑1 (MQ=255) ccGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCa < 1:4403793/71‑1 (MQ=255) cTATATCGGTTAAACTATTTTCACCACCATCATGATGACACTGTTCATGc < 1:2351603/50‑1 (MQ=255) cTATATCGGTAAAACTATTTTCACCACCAgcatgaacagtgtcatcatgatgg > 1:563879‑M1/1‑29 (MQ=255) cTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTa < 1:649012/71‑1 (MQ=255) cTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTa < 1:753506/71‑1 (MQ=255) tatCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTc < 1:3310557/54‑1 (MQ=255) atCGGTAAAACTATTTTCACCACCATCATGATGACACTGtt < 1:1483159/41‑1 (MQ=255) tCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt > 1:1227559/1‑57 (MQ=255) tCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCACTGt > 1:2242718/1‑57 (MQ=255) ggTAAAACTATTTTCACCACCATCATGATGACACTGTTCATg > 1:226774/1‑42 (MQ=255) gTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCg > 1:3593094/1‑56 (MQ=255) aaaaCTATTTTCACCACCATCATGATGACACTGTTCATGCTGgtgt > 1:1364229/1‑46 (MQ=255) aaaCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGt < 1:920836/66‑1 (MQ=255) aaCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCg < 1:859569/71‑1 (MQ=255) aCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGa > 1:283628/1‑71 (MQ=255) aCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGa > 1:1244375/1‑71 (MQ=255) aCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGa < 1:677854/71‑1 (MQ=255) aCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGa > 1:508642/1‑71 (MQ=255) aCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGa < 1:233404/71‑1 (MQ=255) aCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGa < 1:32747/71‑1 (MQ=255) aCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGa > 1:3397069/1‑71 (MQ=255) aCTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGa > 1:2402241/1‑71 (MQ=255) cTATTTTCACCACCATCGTGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt > 1:2217646/1‑71 (MQ=255) cTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt < 1:2091387/71‑1 (MQ=255) cTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt < 1:3978214/71‑1 (MQ=255) cTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt < 1:658384/71‑1 (MQ=255) tATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt < 1:2096683/70‑1 (MQ=255) aTTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGt < 1:18237/46‑1 (MQ=255) aTTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt > 1:1531375/1‑69 (MQ=255) ttttCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAg < 1:2257893/71‑1 (MQ=255) accaccATCATGATGACACTGTTCATGCtggtggtgaaaatagttttaccgatatagcggtcaagtacgc < 1:879705‑M2/70‑43 (MQ=255) accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCg < 1:956075/61‑1 (MQ=255) accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGAt > 1:2560373/1‑63 (MQ=255) accaccATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGa > 1:1466484/1‑70 (MQ=255) caccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCg < 1:4303006/59‑1 (MQ=255) caccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCg < 1:3832151/59‑1 (MQ=255) caccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaaa < 1:4149840/70‑1 (MQ=255) ccagcatgaacagtgtcatcatgatggtggtgaaaatagttttaccgatatagcggtcaagtacgccaa > 1:4084656‑M1/1‑3 (MQ=255) ccaTCATGATGACACTGTTCATGCtggtggtgaaaatagttttaccgatatag > 1:563879‑M2/1‑24 (MQ=255) ccaTCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGaaaaaa < 1:4317388/71‑1 (MQ=255) catcatGATGACACTGTTCATGCTGGTGTCGCTGTCggg < 1:1988811/39‑1 (MQ=255) catcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAg < 1:2477876/71‑1 (MQ=255) catcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAg < 1:1982884/71‑1 (MQ=255) atcatGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGc > 1:1341480/1‑71 (MQ=255) agcatgaacagtgtcatcatgatggtggtgaaaatagttttaccgatatagcggtcaagtacgccaaaagg > 1:1390400‑M1/1‑1 (MQ=255) agcatgaacagtgtcatcatgatggtggtgaaaatagttttaccgatatagcggtcaagtacgccaaaagg > 1:2793816‑M1/1‑1 (MQ=255) agcatgaacagtgtcatcatgatggtggtgaaaatagttttaccgatatagcggtcaagtacgccaaaagg < 1:3494903‑M1/71‑71 (MQ=255) | TAAAGGAGCGGTGTGATGCAACCTTTTGGCGTACTTGACCGCTATATCGGTAAAACTATTTTCACCACCATCATGATGACACTGTTCATGCTGGTGTCGCTGTCGGGCATTATCAAGTTTGTCGATCAGCTGAAAAAAGC > W3110S.gb/4491985‑4492124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |