| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2199347 | 43 (0.860) | 3 (0.060) | 3/96 | NT | 6.8% | coding (1714/2034 nt) | metG | methionyl‑tRNA synthetase |
| ? | W3110S.gb | = 2199369 | 42 (0.890) | coding (1736/2034 nt) | metG | methionyl‑tRNA synthetase | |||||
GCCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGACAAACTGCTGCGCCT > W3110S.gb/2199301‑2199435 | gcCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTt < 1:2163615‑M2/70‑2 (MQ=255) cGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGAc < 1:513584/71‑1 (MQ=255) ggTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGAcc > 1:2529691/1‑71 (MQ=255) aaCTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTg > 1:313847/1‑70 (MQ=255) aCTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTgc < 1:3937848/70‑1 (MQ=255) tGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTgcg < 1:1401932/69‑1 (MQ=255) gCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTt > 1:1865145‑M2/1‑58 (MQ=255) cccGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTgg > 1:1745595/1‑71 (MQ=255) cGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGgcg > 1:2435421/1‑71 (MQ=255) gCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGgcgc > 1:499978/1‑71 (MQ=255) gCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGgcgc > 1:1648341/1‑71 (MQ=255) gCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGgcgc > 1:2973859/1‑71 (MQ=255) cTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCt > 1:2078465/1‑71 (MQ=255) cTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCt < 1:2290385/71‑1 (MQ=255) gatgatCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGAtt > 1:1827937/1‑69 (MQ=255) atgatCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTg > 1:186610/1‑69 (MQ=255) tgatCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGaaa < 1:143570/71‑1 (MQ=255) gatCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGAc > 1:910910/1‑48 (MQ=255) tCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACg > 1:1033611/1‑71 (MQ=255) ccGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGAc > 1:2032250/1‑45 (MQ=255) ccGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACg > 1:1307459/1‑70 (MQ=255) aTTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTtg > 1:2277894‑M2/1‑38 (MQ=255) aTTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGAt > 1:3846792/1‑59 (MQ=255) aTTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGAt > 1:3116604/1‑59 (MQ=255) aTTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCa > 1:674065/1‑69 (MQ=255) ttCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCagag > 1:2187549/1‑71 (MQ=255) tCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGt > 1:4361123/1‑71 (MQ=255) cAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGt < 1:84735/70‑1 (MQ=255) aGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCag < 1:3331682/66‑1 (MQ=255) ggAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTttg < 1:3387588/71‑1 (MQ=255) ggAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTttg < 1:3960672/71‑1 (MQ=255) gAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTttgt > 1:1879552/1‑71 (MQ=255) aaCCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTttgttg < 1:1845890/71‑1 (MQ=255) aaCCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTttgttg < 1:3499688/71‑1 (MQ=255) aaCCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTttgtt > 1:1708425/1‑70 (MQ=255) aCCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGa < 1:2427678/71‑1 (MQ=255) aTCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAgg < 1:4110470/71‑1 (MQ=255) aTCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAgg < 1:3165186/71‑1 (MQ=255) tCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAg > 1:3840563/1‑69 (MQ=255) cACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGaa > 1:4272259/1‑67 (MQ=255) cACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTCATTGAAAACGCagag > 1:3456788/1‑58 (MQ=255) ccTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCt < 1:692659/71‑1 (MQ=255) cTTTGACGACTTCGCTAAAGTtgatggtttcctga > 1:2019232‑M2/1‑21 (MQ=255) cTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTg < 1:3393414/44‑1 (MQ=255) cTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGaaaa < 1:4443016/48‑1 (MQ=255) cTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCt > 1:1448421/1‑70 (MQ=255) tGACGACTTCGCTAAAGTtgatggtttcctgaatcggatcatctgccagcgggccagttacc > 1:613650‑M2/1‑18 (MQ=255) tGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGa < 1:988455/69‑1 (MQ=255) acgacTTCGCTAAAGTtgatggtttcctgaatcggatcatctgccagcgggccagttaccgg < 1:1147694‑M2/62‑47 (MQ=255) gacTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGt < 1:2095404/60‑1 (MQ=255) ttCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGaa < 1:3935554/36‑1 (MQ=255) tCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACg < 1:2105893/39‑1 (MQ=255) cGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGACAAACtgctgc > 1:2596899/1‑71 (MQ=255) gCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGACAAACtgctgc < 1:4151649/70‑1 (MQ=255) aaaGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTg < 1:2638133/55‑1 (MQ=255) aaaGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGACAAACTGCTGCGCCt > 1:3201121/1‑71 (MQ=255) aaGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGACAAACTGCTGCGCCt > 1:3528985/1‑70 (MQ=255) gTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCt < 1:4582618/51‑1 (MQ=255) gTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCt < 1:99378/51‑1 (MQ=255) | GCCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCACCTTTGACGACTTCGCTAAAGTTGACCTGCGCGTGGCGCTGATTGAAAACGCAGAGTTTGTTGAAGGTTCTGACAAACTGCTGCGCCT > W3110S.gb/2199301‑2199435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |