Predicted mutation
evidence seq id position mutation freq annotation gene description
RA W3110S.gb 3,306,434 G→A 27.8% L428L (CTG→TTG)  deaD ← ATP‑dependent RNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*W3110S.gb3,306,4340GA27.8% 25.5 / 8.9 18L428L (CTG→TTG) deaDATP‑dependent RNA helicase
Reads supporting (aligned to +/- strand):  ref base G (7/6);  new base A (3/2);  total (10/8)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01

GTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAG  >  W3110S.gb/3306368‑3306497
                                                                  |                                                               
gTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGcc                                                             <  1:236803/71‑1 (MQ=255)
       aCGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCa                                                      <  1:993242/71‑1 (MQ=255)
       aCGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAATGCCGCAGCCa                                                      <  1:1629159/71‑1 (MQ=255)
            tCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCagag                                                   >  1:347528/1‑69 (MQ=255)
              ggCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTc                                               >  1:1516635/1‑71 (MQ=255)
                           gTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCga                                             <  1:126971/60‑1 (MQ=255)
                               gATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAATGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCAc                              >  1:398453/1‑71 (MQ=255)
                                aTCAGAGTACGTTCACCCTGTGCCATTTTCAGCAATGCCGCAGCCAGAGTTTc                                               <  1:1077319/53‑1 (MQ=255)
                                  cAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCtt                           >  1:129351/1‑71 (MQ=255)
                                  cAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATACAGct                                    >  1:34155/1‑62 (MQ=255)
                                     agTACGTTCACCCTGTGCCATTTTCAGCAATGCCGc                                                           >  1:736482/1‑36 (MQ=255)
                                           ttCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCAc                              <  1:1145791/59‑1 (MQ=255)
                                           ttCACCCTGTGCCATTTTCAGCAGTGCCGAAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCg                  <  1:851071/71‑1 (MQ=255)
                                                 cTGTGCCATTTTCAGCAATGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGaa            >  1:866953/1‑71 (MQ=255)
                                                      ccATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCa                                       >  1:1337096/1‑39 (MQ=255)
                                                      ccATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTg       <  1:1488181/71‑1 (MQ=255)
                                                         ttttCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCt     >  1:930800/1‑70 (MQ=255)
                                                           ttCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTTAATTTTGCTcag  >  1:1118286/1‑71 (MQ=255)
                                                                  |                                                               
GTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAG  >  W3110S.gb/3306368‑3306497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: