| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1572471 | NA (NA) | 5 (0.090) | 3/98 | NT | NA | coding (1289/1401 nt) | gadB | glutamate decarboxylase B, PLP‑dependent |
| ? | W3110S.gb | = 1572521 | NA (NA) | coding (1239/1401 nt) | gadB | glutamate decarboxylase B, PLP‑dependent | |||||
GTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1572437‑1572471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGT < W3110S.gb/1572521‑1572482 GTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTG > 1:3967674/1‑71GTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTG > 1:4361507/1‑71 TAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGT > 1:2854972/1‑71 TAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTG > 1:2135426/1‑70 TCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGT < 1:702445/71‑1 GTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1572437‑1572471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGT < W3110S.gb/1572521‑1572482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |