New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | W3110S.gb | = 1572471 | NA (NA) | 5 (0.090) | 3/98 | NT | NA | coding (1289/1401 nt) | gadB | glutamate decarboxylase B, PLP‑dependent |
? | W3110S.gb | = 1572521 | NA (NA) | coding (1239/1401 nt) | gadB | glutamate decarboxylase B, PLP‑dependent |
GTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1572437‑1572471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGT < W3110S.gb/1572521‑1572482 GTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTG > 1:3967674/1‑71 GTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTG > 1:4361507/1‑71 TAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGT > 1:2854972/1‑71 TAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTG > 1:2135426/1‑70 TCTTCCAGCAACAGTTCAGCAAAGTCCATTTTGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGT < 1:702445/71‑1 GTAGTCTTCCAGCAACAGTTCAGCAAAGTCCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1572437‑1572471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAGCCACCGACATCGTGGTGATGCGCATTATGTGTCGT < W3110S.gb/1572521‑1572482 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |