| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,746,913 | Δ1,199 bp | 100% | [tnaB]–[tnaB] | [tnaB], insH, [tnaB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3746913–3748110 | 3748111 | 2–1199 | 122 [0] | [0] 127 | [tnaB]–[tnaB] | [tnaB],insH,[tnaB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3746912 | 0 (0.000) | 89 (1.820) | 39/90 | NT | 100% | coding (71/447 nt) | tnaB | tryptophan transporter of low affinity |
| ? | W3110S.gb | 3748112 = | 0 (0.000) | coding (871/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
Only 100 of 124 total aligned reads displayed.
CTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746839‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATC > W3110S.gb/3748112‑3748181 CTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:4554258/1‑71 TTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:117688/1‑70 ACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:1239291/71‑1 ACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:1400567/71‑1 CAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:2254073/70‑1 GTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG < 1:1070322/65‑1 CCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC > 1:912872/1‑70 CCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC > 1:4526218/1‑70 CGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCA < 1:4451253/71‑1 CGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC < 1:736570/69‑1 CCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGC < 1:765032/71‑1 AGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAG < 1:4051640/71‑1 GATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGG > 1:662429/1‑71 GATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:2454041/59‑1 ATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA < 1:2772855/68‑1 TAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:909767/1‑59 TAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:113797/1‑59 TAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:1291128/1‑59 AATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:5133771/1‑58 ATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:1858422/70‑1 ATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:2040604/70‑1 CGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA > 1:4855420/1‑63 CGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA > 1:127423/1‑63 CAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGA < 1:4884040/71‑1 CAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGA < 1:4783307/71‑1 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:2837009/71‑1 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:3250633/71‑1 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGA < 1:3243612/70‑1 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACA < 1:2804348/52‑1 ACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG < 1:2166584/55‑1 ACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:4216312/1‑49 ACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:3313897/1‑49 ACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:1401601/1‑49 ACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:4293760/1‑49 CCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACC > 1:3921713/1‑52 CCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACC > 1:2649610/1‑52 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGC > 1:505123/1‑71 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGC > 1:4733747/1‑71 AGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCTGCAGGCAAAA < 1:3231468/59‑1 AGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA < 1:4986468/52‑1 AGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA < 1:2291243/52‑1 AGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA < 1:1038998/52‑1 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCG > 1:3850136/1‑71 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCG > 1:3118179/1‑71 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCG > 1:1777252/1‑71 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG < 1:4357314/49‑1 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:3133701/55‑1 CGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:3235592/55‑1 CACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGT > 1:2486572/1‑71 ACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTG < 1:1146661/69‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:3110608/71‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:2931757/71‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT < 1:1099640/70‑1 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:2215155/1‑71 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:4629390/1‑71 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:5004010/1‑71 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:3505878/70‑1 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:699978/1‑70 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAA > 1:1909409/1‑56 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:4613135/1‑48 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2918406/1‑69 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:3471953/1‑69 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:1287985/1‑69 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:3126798/1‑46 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:1818463/44‑1 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:2128320/44‑1 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:439874/44‑1 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGC > 1:2743619/1‑71 CGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCC > 1:3882278/1‑69 CGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCC > 1:2483220/1‑69 AACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:1748646/46‑1 GGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:3009443/1‑36 GGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:3808399/1‑36 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACG < 1:2578326/70‑1 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACG < 1:3888354/70‑1 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTT < 1:1790547/55‑1 CAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGAT < 1:3725739/71‑1 ACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGa > 1:517167/1‑42 ACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTT > 1:5007873/1‑71 ACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAAT < 1:597382/41‑1 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAC < 1:3479524/71‑1 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAC > 1:119267/1‑71 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTT > 1:2784647/1‑68 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:576115/35‑1 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT > 1:649666/1‑35 GCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:1043916/35‑1 CTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAC > 1:3677387/1‑70 CTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAC > 1:3571704/1‑70 CTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCAC > 1:261612/1‑70 TAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCC < 1:1434149/39‑1 TAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCC < 1:416044/39‑1 AGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGC > 1:138532/1‑71 AGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGC > 1:4624273/1‑71 AGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:631659/1‑44 AGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:2994613/1‑44 AGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:1066006/1‑44 GAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATC < 1:2080022/71‑1 GAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATC < 1:2602756/71‑1 GAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAT > 1:4591930/1‑70 GAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAT > 1:427374/1‑70 CTTAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746839‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATC > W3110S.gb/3748112‑3748181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |