Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2961549	2964219	2671	34 [0]	[0] 10	[ygdB]–[lgt]	[ygdB],ppdB,ppdA,thyA,[lgt]

TGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCATT  >  W3110S.gb/2961488‑2961548                                                             | tGACTTCGCCTGTTCGCCACAACGAGACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:1666/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:6237/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:39680/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:39979/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:44910/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:47272/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:47639/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:5043/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:60176/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:62150/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:37158/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:63709/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:66463/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:69062/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:79055/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:84819/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:8508/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:87928/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:31243/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:29628/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:28817/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:21677/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:21044/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:20843/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:19865/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:18282/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:1779/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:17397/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:1693/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:16577/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:1628/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:13/61‑1 (MQ=255) tGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:12784/61‑1 (MQ=255)  gACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCAtt  <  1:10583/60‑1 (MQ=255)                                                             | TGACTTCGCCTGTTCGCCACAACGAAACGCCTTCATAACCGGCAATCAATAAGGCTTCATT  >  W3110S.gb/2961488‑2961548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑