Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3663256	3665082	1827	100 [0]	[0] 40	[rffG]–[rffD]	[rffG],[rffD]

CGCGCCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTG  >  W3110S.gb/3665083‑3665144 |                                                              cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:69022/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:46589/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:54804/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:6146/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:6189/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:62518/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:63539/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:65857/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:66637/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:68568/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:44440/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:69072/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:69850/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:71332/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:72091/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:73293/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:75996/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:77998/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:81073/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:88116/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:30106/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:16329/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:18373/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:19881/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:20876/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:22029/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:24130/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:26907/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:27160/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:29257/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:148/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:30283/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:30334/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:30870/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:31575/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:35157/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:36020/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:36218/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:37962/62‑1 (MQ=255) cgcgcCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTg  <  1:42924/62‑1 (MQ=255) |                                                              CGCGCCTTTTTTCAGCACTGGCGCAATGGAGCGAGCAGCCGATTCAACGTAGGTCATATCTG  >  W3110S.gb/3665083‑3665144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑