| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 1,492,313 | A→T | pseudogene (115/1001 nt) pseudogene (115/753 nt) |
gapC ← gapC ← |
ECK1409:JW5906+JW1413:b4493; glyceraldehyde‑3‑phosphate dehydrogenase C ECK1409:JW5906:b1417; glyceraldehyde‑3‑phosphate dehydrogenase C, C‑ter fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 1,492,313 | 0 | A | T | 100.0% | 84.5 / NA | 47 | pseudogene (115/1001 nt) pseudogene (115/753 nt) | gapC gapC | ECK1409:JW5906+JW1413:b4493; glyceraldehyde‑3‑phosphate dehydrogenase C ECK1409:JW5906:b1417; glyceraldehyde‑3‑phosphate dehydrogenase C, C‑ter fragment |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (47/0); total (47/0) | |||||||||||
TTTCAGCAGGTAGGCGAGAATTTATGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGT > W3110S.gb/1492290‑1492351 | tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTc > 1:997/1‑57 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:36227/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:35892/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:33898/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:43575/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:48204/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:49136/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:61158/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:73093/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:76203/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:58476/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:20342/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:5138/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATg > 1:8533/1‑61 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:58208/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:61265/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:49251/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:56176/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:62931/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:62974/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:63363/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:63791/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:65850/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:66092/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:7809/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:81228/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:83987/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:84452/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:27959/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:13143/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:13875/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:18414/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:18517/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:21133/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:24766/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:25069/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:25286/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:27811/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:55887/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:29168/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:29656/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:29968/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:38329/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:13000/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:4956/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGt > 1:50838/1‑62 (MQ=255)tttCAGCAGGTAGGCGAGAATTTTTGGGGAAGTGAGATCATTAATAGCGACAACGTCTAGGt > 1:49024/1‑62 (MQ=255) | TTTCAGCAGGTAGGCGAGAATTTATGGGGAAGTGAGATCATTAATAGCGACAACGTCTATGT > W3110S.gb/1492290‑1492351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |