Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 3,304,524 | A→G | G383G (GGT→GGC) | mtr ← | tryptophan transporter of high affinity |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 3,304,524 | 0 | A | G | 98.8% | 158.6 / ‑4.3 | 85 | coding (1149/1245 nt) | mtr | tryptophan transporter of high affinity |
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (84/0); minor base . (1/0); total (85/0) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 |
CCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTT > W3110S.gb/3304496‑3304558 | ccAGAATCAGCGCAATCATCGGCTTGCCGCCTCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:40553/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAAtt > 1:55517/1‑45 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTg > 1:60700/1‑53 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCaaa > 1:86757/1‑58 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGc > 1:16470/1‑60 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:50393/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:47453/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:60014/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:58477/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:57274/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:11885/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:5537/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:53723/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:52075/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:51192/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:48728/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:50301/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:50085/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:49641/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:49327/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:47931/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:49265/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:49137/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:73483/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:85986/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:84122/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:83099/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:82391/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:80986/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:80671/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:80470/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:76220/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:74632/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:60790/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:72171/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:72077/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:71404/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:71182/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:70365/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:67673/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:66900/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:64633/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:20305/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:30770/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:29619/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:29582/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:27765/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:23914/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:23269/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:23064/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:20568/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:20543/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:456/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:18859/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:1712/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:16280/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:15467/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:15048/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:14846/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:13616/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:12332/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:10446/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:32345/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:45804/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:44587/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:44408/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:43568/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:4299/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:39662/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:38695/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:3864/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:3812/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:37370/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:366/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:36588/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:36298/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:36014/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:35907/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:34393/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:32702/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:3164/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGACAAAGCg > 1:88309/1‑61 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCCGCCCCAGACGCGGAAAATCGGGCTGcc > 1:65323/1‑55 (MQ=255) ccAGAATCAGCGCAATCATCGGCTTGCC‑GCCCAGACGCGGAATTTCGGGCTGCCAAAGCGtt > 1:87862/1‑62 (MQ=255) ccAGAATCAGCGAAATCATCGGCTTGCCGCCCCAGACGCGGAATTTCGGGCTGCCAAAGCg > 1:18487/1‑61 (MQ=255) | CCAGAATCAGCGCAATCATCGGCTTGCCACCCCAGACGCGGAATTTCGGGCTGCCAAAGCGTT > W3110S.gb/3304496‑3304558 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |