Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 519,376 | G→T | L140L (CTG→CTT) | ybbA → | predicted transporter subunit |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 519,376 | 0 | G | T | 97.4% | 63.7 / ‑6.4 | 39 | L140L (CTG→CTT) | ybbA | predicted transporter subunit |
Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (0/38); minor base C (0/1); total (0/39) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
GGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGCTGGGTAAACGTCTGGATC > W3110S.gb/519319‑519380 | agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:65120/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:53528/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:55409/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:56603/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:61163/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:61628/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:63421/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:63648/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:64603/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:54807/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:73613/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:77299/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:79348/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:81963/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:82452/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:84717/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:9157/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:35078/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:13117/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:1714/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:18923/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:29058/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:32947/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:34626/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:53223/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:35119/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:35151/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:37114/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:39268/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:4307/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:44073/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:49889/61‑1 (MQ=255) agAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTCGatc < 1:82110/61‑1 (MQ=255) gAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTTGGTAAACGTCTTGatc < 1:80411/61‑1 (MQ=255) gAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:75704/61‑1 (MQ=255) gAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:4920/61‑1 (MQ=255) gAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:12448/61‑1 (MQ=255) gAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTGGGGTAAACGTCTTGatc < 1:52913/61‑1 (MQ=255) cGGGGCGAAAGCGTTGCTCGAACAGTTAGGGTTGGGTAAACGTCTTGatc < 1:87166/50‑1 (MQ=255) | GGAAAGTCGTAACGGGGCGAAAGCGTTGCTCGAACAGTTAGGGCTGGGTAAACGTCTGGATC > W3110S.gb/519319‑519380 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |