Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 1,523,904 | 2 bp→TT | coding (875‑876/2103 nt) | yncD ← | predicted iron outer membrane transporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 1,523,904 | 0 | C | T | 100.0% | 178.4 / NA | 95 | R292Q (CGG→CAA) | yncD | predicted iron outer membrane transporter |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (95/0); total (95/0) | |||||||||||
* | W3110S.gb | 1,523,905 | 0 | C | T | 100.0% | 178.9 / NA | 95 | R292Q (CGG→CAA) | yncD | predicted iron outer membrane transporter |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (95/0); total (95/0) |
CCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCC > W3110S.gb/1523875‑1523936 || ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTATGCTCATAGCGCAAccc > 1:73467/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACg > 1:10022/1‑47 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:67412/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:69086/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:62955/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:62867/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:62815/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:62082/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:61626/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:61550/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:60211/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:5829/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:5777/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:57481/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:57403/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:57089/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:55605/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:5552/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:5448/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:54384/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:53781/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:53779/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:51342/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:50735/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:80377/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:9510/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:88335/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:87705/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:87659/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:87639/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:86887/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:84334/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:8217/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:81309/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:81292/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:80765/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:68849/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:80342/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:79684/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:78997/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:78441/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:77396/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:7550/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:74753/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:72613/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:69462/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:5065/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:20239/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:32056/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:50401/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:30301/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:28876/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:28753/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:27522/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:25637/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:2425/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:2387/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:22700/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:20565/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:31683/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:18341/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:18193/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:16597/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:16033/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:1597/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:14524/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:13039/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:12326/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:11790/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:11289/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:3370/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:50276/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:50021/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:49618/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:47715/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:46707/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:4557/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:44450/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:43576/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:41723/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:40572/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:40427/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:39589/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:37920/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:37518/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:36365/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:34784/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:33985/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:3375/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:32901/1‑62 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAcca > 1:42145/1‑61 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAcc > 1:25773/1‑61 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAc > 1:22508/1‑60 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGCGCGCTCAGGCTACGCTCATAGCGCAAc > 1:50843/1‑60 (MQ=255) ccGGCATACATCATCACACTCATATCATCTTGAGCGCTCAGGCTACGCTCATAGCGCAAccc > 1:72254/1‑62 (MQ=255) || CCGGCATACATCATCACACTCATATCATCCCGCGAACTCAGGCTACGCTCATAGCGCAACCC > W3110S.gb/1523875‑1523936 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |