| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 1,838,037 | 2 bp→TT | coding (251‑252/1167 nt) | ynjB → | conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 1,838,037 | 0 | C | T | 100.0% | 34.8 / NA | 22 | A84V (GCC→GTT) | ynjB | conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (0/22); total (0/22) | |||||||||||
| * | W3110S.gb | 1,838,038 | 0 | C | T | 100.0% | 34.5 / NA | 22 | A84V (GCC→GTT) | ynjB | conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (0/22); total (0/22) | |||||||||||
GACCGAAGCCGCAGCCGGACGTAAAACGGGCGGCTCGGTGGATCTGCTCTGGGTGAACGGC > W3110S.gb/1838029‑1838089 || gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:51372/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:938/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:75823/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:73724/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:7206/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:70920/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:690/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:6735/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:6676/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:63858/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:60441/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:18004/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:50099/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:49870/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:4868/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:38714/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:35642/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:33303/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:28822/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:19067/61‑1 (MQ=38)gACCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:18147/61‑1 (MQ=38) aCCGAAGTTGCTGCCGGACGTAAAACGGGCGGTTCGGTGGATCTGCTCTGGGTGAACGGc < 1:37943/60‑1 (MQ=38) || GACCGAAGCCGCAGCCGGACGTAAAACGGGCGGCTCGGTGGATCTGCTCTGGGTGAACGGC > W3110S.gb/1838029‑1838089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |