| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 4,248,181 | 3 bp→CGC | coding (485‑487/1545 nt) | malF ← | maltose transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 4,248,181 | 0 | T | C | 100.0% | 68.6 / NA | 39 | T163A (ACC→GCC) | malF | maltose transporter subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (0/39); total (0/39) | |||||||||||
| * | W3110S.gb | 4,248,182 | 0 | C | G | 100.0% | 72.5 / NA | 39 | T162S (ACG→AGC) | malF | maltose transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (0/39); total (0/39) | |||||||||||
| * | W3110S.gb | 4,248,183 | 0 | G | C | 100.0% | 69.7 / NA | 39 | T162S (ACG→AGC) | malF | maltose transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (0/39); total (0/39) | |||||||||||
CGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAA > W3110S.gb/4248155‑4248217 ||| cgcgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATT‑CAGTTTTTGCTCGCCGCCaaa < 1:42089/62‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:63965/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:49304/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:56452/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:56849/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:60624/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:6119/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:6132/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:61332/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:62071/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:44876/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:66167/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:67795/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:69728/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:71941/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:74073/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:74749/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:75731/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:81697/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:82675/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:28501/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:12601/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:14687/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:17421/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:17632/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:21401/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:22060/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:26316/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:27323/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:27969/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:48026/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:32096/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:33229/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:35515/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:38745/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:39120/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:42155/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:42337/61‑1 (MQ=255) cgcgCTCGCCTTCAGGCTGCGTGGCGCTTTCTTTCAATTGCAGTTTTTGCTCGCCGCCaaa < 1:10/61‑1 (MQ=255) ||| CGCGCGTTCGCCTTCGGGCTGGGCGGTCGTTTCTTTCAGTTGCAGTTTTTGCTCGCCGCCAAA > W3110S.gb/4248155‑4248217 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |