| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | W3110S.gb | 654,214 | Δ1,199 bp | [dcuC]–[dcuC] | [dcuC], insH, [dcuC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 654214–655410 | 655412 | 3–1199 | 62 [0] | [0] 64 | [dcuC]–[dcuC] | [dcuC],insH,[dcuC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 654213 | 0 (0.000) | 60 (1.380) | 13/100 | 0.1 | 100% | coding (70/477 nt) | dcuC | anaerobic C4‑dicarboxylate transport |
| ? | W3110S.gb | 655413 = | 0 (0.000) | coding (978/1092 nt) | dcuC | anaerobic C4‑dicarboxylate transport | |||||
CGCCGAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/654154‑654213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaagCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGC > W3110S.gb/655413‑655472 CGCCGAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCC > 1:2992424/1‑62CGCCGAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCC > 1:2839589/1‑62 GAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:2640278/59‑1 GAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:3614074/59‑1 GAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:3364741/59‑1 GAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:2667718/59‑1 GAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:4355513/59‑1 GAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:1903172/59‑1 GAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:2777800/59‑1 GAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCCATGGTGCTAAGCCC < 1:2138954/59‑1 AACCAAACGAGGTAGCGATAGAAATCAGACTTTTGAATAAAGCCGATGGTGCTAAGCCCCTG > 1:1187145/1‑62 AACCAAACGAGGTAGCGATAGAAATCAGACTTTTGAATAAAGCCGATGGTGCTAAGCCCCTG > 1:1287253/1‑62 AACCAAACGAGGTAGCGATAGAAATCAGACTTTTGAATAAAGCCGATGGTGCTAAGCCCCTG > 1:3214690/1‑62 AACCAAACGAGGTAGCGATAGAAATCAGACTTTTGAATAAAGCCGATGGTGCTAAGCCCCTG > 1:1709297/1‑62 AACCAAACGAGGTAGCGATAGAAATCAGACTTTTGAATAAAGCCGATGGTGCTAAGCCCCT > 1:4212668/1‑61 ACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:466190/1‑59 ACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:4320439/1‑59 ACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:1436064/1‑59 ACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:3771472/1‑59 AGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAA < 1:2048417/62‑1 AGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:108088/39‑1 AGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:2306030/39‑1 AGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCC < 1:157719/39‑1 GAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAA < 1:4191494/61‑1 GAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAA < 1:2051646/61‑1 GAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAA < 1:2865544/61‑1 GAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAA < 1:2958659/61‑1 AAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:1932320/1‑44 AATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCA < 1:1299382/62‑1 AATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCA < 1:723937/62‑1 AATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCA < 1:1030430/62‑1 AATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCA < 1:3201721/62‑1 AATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCA < 1:1906224/62‑1 AATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCA < 1:1723980/62‑1 ATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAAC < 1:4622013/59‑1 ATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAAC < 1:2838238/59‑1 ATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAAC < 1:3824399/59‑1 ATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAAC < 1:567577/59‑1 ATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAAC < 1:558178/59‑1 TCAGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCA < 1:4691023/60‑1 AGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:778232/1‑39 AGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:664030/1‑39 AGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:4622250/1‑39 AGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:4664860/1‑39 AGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:371280/1‑39 AGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:1441867/1‑39 AGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:2229862/1‑39 AGAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCG > 1:234024/1‑39 GAC‑TTTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCA < 1:2717187/57‑1 TTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCA < 1:3487231/62‑1 TTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCA < 1:2460512/62‑1 TTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCA < 1:2611812/62‑1 TTGAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCA < 1:4334995/62‑1 GAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACC > 1:4559314/1‑62 GAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACC > 1:3281115/1‑62 GAATAAAGCCGATGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACC > 1:11279/1‑62 TGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAA > 1:2945111/1‑61 TGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAA > 1:3234930/1‑61 TGGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAA > 1:2210896/1‑61 GGTGCTAAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACG < 1:154104/62‑1 AAGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGC < 1:705451/51‑1 AGCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGC > 1:3088015/1‑62 CGCCGAACCAAACGAGGTAGCGATAGAAATCAGAC‑TTTGAATAAAGCCGATGGTGCTAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/654154‑654213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaagCCCCTGAGCGAATACCCCAGCGGCAACCAGCAGCATCACCACGTTAGCAAACGCATCTGC > W3110S.gb/655413‑655472 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |