| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 46 (0.960) | 8/110 | 0.4 | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACA > W3110S.gb/315671‑315757 | cGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCAct < 1:996808/62‑1 (MQ=255)agCTTAGGCCTTTGTCCATATTACGTGGGTAGGATGATAAAGTCATCGGGTCGGTGTCctct < 1:1261989/61‑1 (MQ=18) tgtgTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:1107477/1‑59 (MQ=255) tgtgTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:260728/1‑59 (MQ=255) tgtgTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:3473605/1‑59 (MQ=255) tCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGt < 1:232114/60‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:2806955/62‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:3876595/62‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:255269/62‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:3851597/62‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:2990668/62‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:3504244/62‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:2017766/62‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:699023/62‑1 (MQ=255) cATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:1257108/62‑1 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTg > 1:158006/1‑49 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTc > 1:2665085/1‑56 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:4490687/1‑60 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:4648014/1‑60 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:2948633/1‑60 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:1181846/1‑60 (MQ=255) atTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:3469456/1‑60 (MQ=255) tACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCatat > 1:2321021/1‑61 (MQ=255) cGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:1235449/1‑46 (MQ=255) cGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCa > 1:3009544/1‑48 (MQ=255) cGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCa > 1:4467145/1‑48 (MQ=255) cGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCa > 1:4161357/1‑48 (MQ=255) cGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCa > 1:2109276/1‑48 (MQ=255) cGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCa > 1:889944/1‑48 (MQ=255) ggTAGGATCATAACGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca > 1:2602460/1‑58 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCGCTCTTTTgg > 1:4105254/1‑42 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:3666373/1‑42 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:1022226/1‑42 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:8832/1‑42 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:3370286/1‑42 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:1156265/1‑42 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:1369396/1‑42 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTgg > 1:1645510/1‑42 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca > 1:1008629/1‑58 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca > 1:3440097/1‑58 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca > 1:578348/1‑58 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTca > 1:3756879/1‑58 (MQ=255) ggTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTc > 1:2171157/1‑57 (MQ=255) ggATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGc < 1:3182410/47‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGTCATGTCAGCATAtt < 1:94967/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:2959689/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:3186677/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:3118345/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:2992502/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:2960256/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:4510945/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:2349219/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:4400774/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:239952/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:4027895/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATAtt < 1:28008/50‑1 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:3772938/1‑54 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:1678888/1‑54 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:243567/1‑54 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:3173191/1‑54 (MQ=255) aTCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATCTCCGCatat > 1:3837771/1‑49 (MQ=255) | CGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACA > W3110S.gb/315671‑315757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |