| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 2412225 | NA (NA) | 55 (1.150) | 13/110 | 0.1 | 77.5% | intergenic (‑55/‑782) | insA/yfbQ | IS1 element protein/predicted aminotransferase |
| ? | W3110S.gb | = 3748807 | 16 (0.330) | coding (176/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAT > W3110S.gb/2412173‑2412269 | gAGCACCTCAAAAACACCATCATAGACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCg > 1:2913898/1‑62 (MQ=255)gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCg > 1:1143589/1‑62 (MQ=255)gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCg > 1:1728587/1‑62 (MQ=255)gAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCg > 1:1704643/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:4329258/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:2021326/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:3382448/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:1743507/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:3942232/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:4255831/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:1644014/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:16388/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:1520846/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:2535189/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:1308565/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:3645354/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:2380044/1‑62 (MQ=255) cTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcac > 1:2554908/1‑62 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcaca > 1:2106260/1‑62 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcaca > 1:4308605/1‑62 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcaca > 1:2365147/1‑62 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcaca > 1:3639182/1‑62 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcaca > 1:1371781/1‑62 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTcaca > 1:1022145/1‑62 (MQ=255) tCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTca > 1:3069507/1‑60 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGTCAGCATCACCAAAAAAGCGACTCACAtt > 1:2234369/1‑61 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACAtt > 1:590270/1‑61 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTg > 1:2375775/1‑62 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTg > 1:1980155/1‑62 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTg > 1:1363820/1‑62 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTg > 1:1350261/1‑62 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTg > 1:4549712/1‑62 (MQ=255) aaaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTg > 1:3849712/1‑62 (MQ=255) aaaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGt < 1:3372242/62‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGt < 1:2240008/61‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGt < 1:2647832/61‑1 (MQ=255) aaCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGt < 1:2090858/61‑1 (MQ=255) cacCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:4545748/1‑62 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGtt > 1:1897002/1‑59 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:4506275/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:3862215/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:2493963/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:2415135/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:236217/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:905824/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:4650642/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:716872/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:4683475/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:1985372/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTcc > 1:1731349/1‑61 (MQ=255) acCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTc > 1:1000355/1‑60 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:2274474/62‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:4332630/62‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:4466353/62‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:3744503/62‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:1686065/62‑1 (MQ=255) ccATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:415451/62‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:4350521/61‑1 (MQ=255) catcatACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:2762468/61‑1 (MQ=255) tcatACACTAAATCTGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGt < 1:1808202/59‑1 (MQ=255) cacTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGtt < 1:1931194/50‑1 (MQ=255) cacTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGtt < 1:2983164/50‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACAtt > 1:2921934/1‑36 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:4122219/62‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:3897702/62‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:4193572/62‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt > 1:1007153/1‑62 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:3531329/62‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt > 1:1115986/1‑62 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:2110721/62‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt > 1:2236051/1‑62 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:2262824/62‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:2364446/62‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:2793744/62‑1 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt > 1:3760389/1‑62 (MQ=255) tAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt > 1:3088342/1‑62 (MQ=255) aaGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:2703634/61‑1 (MQ=255) aaGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:444612/61‑1 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:226710/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:1135337/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:1862451/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:556941/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:2035723/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:3912697/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:2210261/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:34232/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:3339824/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:3021643/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:2827095/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:4289493/1‑48 (MQ=255) aTCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAg > 1:3018112/1‑48 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGcc < 1:4324470/37‑1 (MQ=255) aCCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAt < 1:4161682/47‑1 (MQ=255) | GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCAAAAAAGCGACTCACATTGTTCCGTTATAATGCCTGAAGTAGAT > W3110S.gb/2412173‑2412269 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |