Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1172355	1172362	8	6 [0]	[1] 5	mfd	transcription‑repair coupling factor

CCTTTCTCATTACCTTCCAGCTTCCTGATCCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAA  >  W3110S.gb/1172291‑1172354                                                                | ccTTTCTCATTACCTT‑‑AGCTTCCTGATCCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCaa  <  1:136648/62‑1 (MQ=39)   tttCTCATTACCTTCCAGCTTCCTGATCCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCaa  <  1:1672692/62‑1 (MQ=255)   tttCTCATTACCTTCCAGCTTCCTGATCCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCaa  <  1:3216347/62‑1 (MQ=255)    ttCTCATTACCTTCCAGCTTCCTGATCCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCaa  <  1:1472959/61‑1 (MQ=255)    ttCTCATTACCTTCCAGCTTCCTGATCCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCaa  <  1:3706002/61‑1 (MQ=255)                tCCAGCTTCCTGATCCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCaa  <  1:218878/49‑1 (MQ=255)                                                                | CCTTTCTCATTACCTTCCAGCTTCCTGATCCCCAGTTTCTGCGCTTGCTGGCGCAGACGGGCAA  >  W3110S.gb/1172291‑1172354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑