Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2499461	2499481	21	44 [0]	[0] 57	yfdX	hypothetical protein

CCATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGCTT  >  W3110S.gb/2499401‑2499460                                                            | ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCTATTTTTATCGCGGctt  <  1:285560/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:596173/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:366667/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1028972/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:446529/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:467440/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:480092/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:480411/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:563878/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:571952/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:584026/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:36628/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:61138/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:622532/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:653956/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:664316/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:853325/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:689128/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:745435/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:799308/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:842056/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1344156/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1109754/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1121288/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1190554/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1258294/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1288183/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:131646/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1327674/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1339741/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:96017/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1416220/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1448974/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:169535/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:243867/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:273838/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:35582/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGCCAATTTTTATCGCGGctt  <  1:949355/60‑1 (MQ=255) ccATTGCGCCCTTTTTATCCCCTTCCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1331600/60‑1 (MQ=255)  cATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:388078/59‑1 (MQ=255)  cATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1372873/59‑1 (MQ=255)   aTTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:990215/58‑1 (MQ=255)     tGCGGCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:688241/56‑1 (MQ=255)       cgcCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGctt  <  1:1348997/54‑1 (MQ=255)                                                            | CCATTGCGCCCTTTTTATCCCCTTTCGCCATTTTTTCATTGGCAATTTTTATCGCGGCTT  >  W3110S.gb/2499401‑2499460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑