Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2594827	2595181	355	51 [0]	[0] 23	ypfJ	conserved hypothetical protein

GCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTCGC  >  W3110S.gb/2594765‑2594826                                                              | gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:638406/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:296756/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:304204/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:3606/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:371216/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:496568/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:514390/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:530203/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:539712/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:576397/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:611612/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:616394/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:634362/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:288419/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:642748/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:651979/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:757762/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:802462/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:840791/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:869346/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:88351/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:891176/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:957100/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:978136/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:982071/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:990303/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1342145/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1024148/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1082031/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1084221/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1129086/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1144612/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1153702/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:117261/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:119493/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1205211/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1260675/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1289549/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1334571/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1013358/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1375830/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1385453/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1416457/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:1425601/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:142745/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:149555/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:162071/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:170816/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:207470/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:220177/1‑62 (MQ=255) gCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTcgc  >  1:231898/1‑62 (MQ=255)                                                              | GCAAAACAGTCGGCCTGGAGTTCCATACGCACAGATAAGCGGTTTACTTCCGCCTGCGTCGC  >  W3110S.gb/2594765‑2594826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑