Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2733928	2734091	164	46 [0]	[0] 59	rluD	23S rRNA pseudouridine synthase

TAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCCCACC  >  W3110S.gb/2733866‑2733927                                                              | tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAAGCGGATCGCccacc  >  1:428455/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:697521/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1011747/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:4941/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:498758/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:507230/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:525804/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:533492/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:547021/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:548257/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:555002/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:556851/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:386070/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:789403/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:790552/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:810433/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:816288/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:81833/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:824022/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:960161/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:964483/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:966396/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:980457/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1470725/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1041478/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:10514/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1099958/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1242061/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1262270/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1311381/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1421530/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1441960/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1444205/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:1455438/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:370125/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:148555/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:167506/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:182884/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:236646/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:238642/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:274083/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:274639/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:303722/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:340216/1‑62 (MQ=255) tAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:354677/1‑62 (MQ=255) tAAATGCTTCCGAAGAACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCccacc  >  1:809709/1‑62 (MQ=255)                                                              | TAAATGCTTCCGAAGCACCTTTTGGCGGACGCGGACGGCCACCATAAACCGGATCGCCCACC  >  W3110S.gb/2733866‑2733927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑