Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2821005	2821021	17	37 [0]	[0] 49	recX	regulatory protein for RecA

ACATTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTG  >  W3110S.gb/2820957‑2821004                                                | acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:770483/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:347456/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:353994/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:557735/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:564457/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:646489/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:689802/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:741501/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:769706/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:32023/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:800181/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:815615/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:898670/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:91365/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:937040/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:938740/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:963417/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:973795/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1336076/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1042128/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1121740/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1139446/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1141017/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1141150/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1257757/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1260591/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1261896/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1005291/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1391429/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1394599/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:153101/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:157525/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:206988/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:269917/48‑1 (MQ=255) acaTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:297888/48‑1 (MQ=255)  caTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:1363572/47‑1 (MQ=255)  caTTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTg  <  1:876081/47‑1 (MQ=255)                                                | ACATTCACGCATCGCTTTTTCTGTCGCTTCGCGGGAAATACCTTTCTG  >  W3110S.gb/2820957‑2821004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑