Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3038115	3038128	14	8 [0]	[0] 19	xerD	site‑specific tyrosine recombinase

CGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGG  >  W3110S.gb/3038057‑3038114                                                          | cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTggg  >  1:1226526/1‑58 (MQ=255) cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTggg  >  1:1407691/1‑58 (MQ=255) cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTggg  >  1:1452424/1‑58 (MQ=255) cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTggg  >  1:434248/1‑58 (MQ=255) cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTggg  >  1:546393/1‑58 (MQ=255) cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTggg  >  1:672379/1‑58 (MQ=255) cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTggg  >  1:780845/1‑58 (MQ=255) cgcttAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTggg  >  1:902084/1‑58 (MQ=255)                                                          | CGCTTAAATCTTTTGGCAAACGCTGGGGCAATTTCGGTGAAGCGAGATGCGCACTGGG  >  W3110S.gb/3038057‑3038114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑