Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3098171	3098211	41	8 [0]	[0] 41	yggM	conserved hypothetical protein

ATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATT  >  W3110S.gb/3098133‑3098170                                      | atatTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCAtt  >  1:1109030/1‑38 (MQ=255) atatTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCAtt  >  1:1278160/1‑38 (MQ=255) atatTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCAtt  >  1:1443627/1‑38 (MQ=255) atatTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCAtt  >  1:159451/1‑38 (MQ=255) atatTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCAtt  >  1:222615/1‑38 (MQ=255) atatTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCAtt  >  1:231092/1‑38 (MQ=255) atatTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCAtt  >  1:4645/1‑38 (MQ=255) atatTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCAtt  >  1:756358/1‑38 (MQ=255)                                      | ATATTTTCAGTTGGCGGTTCGCCATCTGCCCAGGCATT  >  W3110S.gb/3098133‑3098170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑