Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3169796	3170201	406	29 [0]	[0] 71	qseC	sensory histidine kinase in two‑component regulatory system with QseB

CGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACT  >  W3110S.gb/3169734‑3169795                                                              | cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:456830/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:991868/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:972910/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:856660/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:855901/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:828996/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:792094/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:668784/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:641117/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:62718/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:623617/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:621450/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:593459/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:590517/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:497943/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:1099839/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:358668/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:357228/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:335281/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:316911/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:289942/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:143095/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:1423274/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:1413503/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:1329501/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:1324194/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:1306403/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:1248358/1‑62 (MQ=255) cGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACt  >  1:110014/1‑62 (MQ=255)                                                              | CGTGACCCTGACTCGGAAAAACCACTAAACGCGACTGGCGTACCCAGCGAAGTGCGGCCACT  >  W3110S.gb/3169734‑3169795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑