Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3172561	3172616	56	40 [0]	[0] 36	parE	DNA topoisomerase IV, subunit B

GTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAA  >  W3110S.gb/3172499‑3172560                                                              | gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:697234/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1033413/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:4768/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:489590/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:509213/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:520480/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:530711/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:553456/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:631693/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:678858/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:418962/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:780823/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:782908/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:800423/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:828041/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:849766/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:871285/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:89262/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:895948/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:921342/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:12390/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1050121/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1051417/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1069378/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1175372/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1191229/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1194334/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1195896/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1210325/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:125298/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:131627/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1326532/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1335915/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1382513/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1425455/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:16768/62‑1 (MQ=255) gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:329273/62‑1 (MQ=255) gTGACCGTGTTTCAACAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:1143297/62‑1 (MQ=255)            tCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:414140/51‑1 (MQ=255)                    gcgcgGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCaa  <  1:613414/43‑1 (MQ=255)                                                              | GTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAA  >  W3110S.gb/3172499‑3172560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑