Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3284387	3284457	71	45 [0]	[0] 17	agaB	N‑acetylgalactosamine‑specific enzyme IIB component of PTS

TGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATCAGCAG  >  W3110S.gb/3284336‑3284386                                                   | tGTCAACGTCGGCAATATGCATTTCTCTGAAGGGAAAAAGCAAATcagcag  <  1:1182367/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCATATcagcag  <  1:1374682/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:592978/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:302541/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:337571/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:371142/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:382573/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:431968/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:436482/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:448404/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:450076/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:468425/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:530686/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:297461/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:603446/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:624690/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:689149/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:759327/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:85338/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:85523/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:876283/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:924081/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:144408/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1044403/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1055067/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1124335/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1138696/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1160757/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1227865/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1234676/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1282694/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1405827/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1412199/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:142867/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1009243/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1447503/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1460340/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:1461285/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:168013/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:16957/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:217630/51‑1 (MQ=255) tGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:2632/51‑1 (MQ=255)   tCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:430118/49‑1 (MQ=255)       cGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:353819/45‑1 (MQ=255)        gTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATcagcag  <  1:327700/44‑1 (MQ=255)                                                   | TGTCAACGTCGGCAATATGCATTTCTCGGAAGGGAAAAAGCAAATCAGCAG  >  W3110S.gb/3284336‑3284386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑