Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3347859	3347872	14	77 [0]	[0] 6	npr	phosphohistidinoprotein‑hexose phosphotransferase component of N‑regulated PTS system (Npr)

TCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCT  >  W3110S.gb/3347797‑3347858                                                              | tCGTACGCTGGTAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:150455/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:591893/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:743061/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:722958/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:708677/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:688770/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:6682/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:660204/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:648073/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:627504/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:801721/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:579169/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:57186/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:567012/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:566626/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:553312/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:548138/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:546893/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:516294/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:50042/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:879456/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:999254/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:960361/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:951663/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:949194/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:94787/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:933402/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:93248/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:893825/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:893479/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:450751/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:866399/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:859015/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:858162/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:856536/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:844890/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:825521/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:824685/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:807431/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1192547/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1360389/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1348582/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1322963/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1316453/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:12889/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1264035/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1218847/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1212840/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1199837/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1412714/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1163228/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1162640/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1154115/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:112281/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1079943/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1072979/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:106485/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1050843/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:299862/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1050168/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:450478/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:41535/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:409115/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:392216/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:372295/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:357126/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:34139/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:333964/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:2865/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:218780/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:210313/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:151242/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1468677/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1430546/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1419130/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCt  >  1:1417365/1‑62 (MQ=255) tCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGATGAAATCACAAACAAGCt  >  1:489313/1‑62 (MQ=255)                                                              | TCGTACGCTGGAAAAACGTAAACCATGACCGTCAAGCAAACTGTTGAAATCACAAACAAGCT  >  W3110S.gb/3347797‑3347858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑