Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3450332	3450608	277	52 [0]	[0] 48	rpoC	RNA polymerase, beta prime subunit

TACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTT  >  W3110S.gb/3450270‑3450331                                                              | tACAGACCGACCGGAGTAGTCAACACGCTTACCGTGCAGGTTCTCACGGAAACGACCCTGtt  <  1:54955/62‑1 (MQ=255) tACAGAACGACCGGCGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:766833/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:667692/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:380318/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:446828/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1016121/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:477237/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:583292/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:621348/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:62694/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:638599/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:646027/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:468751/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:6804/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:74070/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:754344/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:805398/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:835668/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:883235/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:981946/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:992676/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1029523/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1109136/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1183351/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1198067/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1103727/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1076335/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:124161/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1254104/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1264988/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1287890/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1375491/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1066605/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1040734/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:169226/62‑1 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTAACGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:217155/62‑1 (MQ=255) tACAGAACGACCGGAGTAGGCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:705980/62‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGATGGAAACGACCCTGtt  <  1:420174/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:846623/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:840092/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1070041/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:763225/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:658660/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:122307/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:58443/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1419720/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:158172/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCATGtt  <  1:670142/61‑1 (MQ=255)  aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCATGtt  <  1:586463/61‑1 (MQ=255)     gAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:268605/58‑1 (MQ=255)              gAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:1281800/49‑1 (MQ=255)                     cAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt  <  1:230630/42‑1 (MQ=255)                                                              | TACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTT  >  W3110S.gb/3450270‑3450331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑