Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3457104	3457275	172	43 [0]	[0] 24	rplA	50S ribosomal subunit protein L1

AGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGTT  >  W3110S.gb/3457044‑3457103                                                            | aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:658694/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:360313/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:416040/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:426626/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:442436/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:453364/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:470902/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:516821/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:545385/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:552214/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:617138/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:329267/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:65992/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:67748/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:725103/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:760815/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:776408/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:81673/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:91994/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:975756/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:98987/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:993168/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1343253/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1054994/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1091290/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1100231/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1100504/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1104035/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1139806/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1227927/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1288238/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1292419/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1325880/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1014633/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1397721/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1407555/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1440493/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:1441709/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:160525/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:198654/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:20793/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:251367/1‑60 (MQ=255) aGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGtt  >  1:294001/1‑60 (MQ=255)                                                            | AGCATTATACGTGGGGGTAAGATTGTAGACAAAATCACCGCCCACGTAAAGGCATTAGTT  >  W3110S.gb/3457044‑3457103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑